Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.48□□□□□ -1.53
LdlrP35951 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LdlrP35951 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
LdlrP35951 AC122357.1-201ENSMUST00000221652 1515 ntBASIC5.48□□□□□ -1.53
LdlrP35951 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LdlrP35951 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
LdlrP35951 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LdlrP35951 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.47□□□□□ -1.53
LdlrP35951 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
LdlrP35951 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LdlrP35951 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
LdlrP35951 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
LdlrP35951 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.47□□□□□ -1.53
LdlrP35951 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
LdlrP35951 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
LdlrP35951 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.47□□□□□ -1.53
LdlrP35951 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
LdlrP35951 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
LdlrP35951 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LdlrP35951 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC5.47□□□□□ -1.53
LdlrP35951 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
LdlrP35951 Gm13537-201ENSMUST00000120467 267 ntBASIC5.47□□□□□ -1.53
LdlrP35951 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC5.47□□□□□ -1.53
LdlrP35951 Gm7309-201ENSMUST00000121670 581 ntBASIC5.47□□□□□ -1.53
LdlrP35951 Gm22106-201ENSMUST00000122544 127 ntBASIC5.47□□□□□ -1.53
LdlrP35951 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.47□□□□□ -1.53
LdlrP35951 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.47□□□□□ -1.53
LdlrP35951 Gm22867-201ENSMUST00000157499 109 ntBASIC5.47□□□□□ -1.53
LdlrP35951 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC5.47□□□□□ -1.53
LdlrP35951 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC5.47□□□□□ -1.53
LdlrP35951 Mir3080-201ENSMUST00000175010 79 ntBASIC5.47□□□□□ -1.53
LdlrP35951 Gm26652-202ENSMUST00000181672 475 ntBASIC5.47□□□□□ -1.53
LdlrP35951 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC5.47□□□□□ -1.53
LdlrP35951 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.47□□□□□ -1.53
LdlrP35951 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC5.47□□□□□ -1.53
LdlrP35951 Gm9236-201ENSMUST00000196892 587 ntBASIC5.47□□□□□ -1.53
LdlrP35951 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC5.47□□□□□ -1.53
LdlrP35951 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.47□□□□□ -1.53
LdlrP35951 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LdlrP35951 Gm33601-201ENSMUST00000210001 961 ntBASIC5.47□□□□□ -1.53
LdlrP35951 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.47□□□□□ -1.53
LdlrP35951 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC5.47□□□□□ -1.53
LdlrP35951 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.47□□□□□ -1.53
LdlrP35951 Gm9628-201ENSMUST00000222169 725 ntBASIC5.47□□□□□ -1.53
LdlrP35951 CT572983.1-201ENSMUST00000226895 514 ntBASIC5.47□□□□□ -1.53
LdlrP35951 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
LdlrP35951 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC5.47□□□□□ -1.53
LdlrP35951 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.47□□□□□ -1.53
LdlrP35951 Gm25682-201ENSMUST00000083942 164 ntBASIC5.47□□□□□ -1.53
LdlrP35951 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC5.47□□□□□ -1.53
LdlrP35951 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC5.47□□□□□ -1.53
LdlrP35951 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LdlrP35951 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LdlrP35951 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LdlrP35951 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LdlrP35951 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.47□□□□□ -1.53
LdlrP35951 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LdlrP35951 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
LdlrP35951 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
LdlrP35951 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LdlrP35951 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.46□□□□□ -1.53
LdlrP35951 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
LdlrP35951 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
LdlrP35951 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
LdlrP35951 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
LdlrP35951 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.46□□□□□ -1.53
LdlrP35951 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.46□□□□□ -1.53
LdlrP35951 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
LdlrP35951 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
LdlrP35951 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
LdlrP35951 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
LdlrP35951 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.46□□□□□ -1.54
LdlrP35951 Gm15531-201ENSMUST00000118062 252 ntBASIC5.46□□□□□ -1.54
LdlrP35951 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
LdlrP35951 Gm13579-201ENSMUST00000118519 517 ntBASIC5.46□□□□□ -1.54
LdlrP35951 Gm13367-201ENSMUST00000119955 796 ntBASIC5.46□□□□□ -1.54
LdlrP35951 Gm15019-201ENSMUST00000120148 434 ntBASIC5.46□□□□□ -1.54
LdlrP35951 Gm14939-201ENSMUST00000120347 680 ntBASIC5.46□□□□□ -1.54
LdlrP35951 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
LdlrP35951 Gm14907-201ENSMUST00000121948 854 ntBASIC5.46□□□□□ -1.54
LdlrP35951 Gm6568-201ENSMUST00000122274 697 ntBASIC5.46□□□□□ -1.54
LdlrP35951 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC5.46□□□□□ -1.54
LdlrP35951 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.46□□□□□ -1.54
LdlrP35951 Gm24692-201ENSMUST00000157761 146 ntBASIC5.46□□□□□ -1.54
LdlrP35951 Gm22261-201ENSMUST00000158691 324 ntBASIC5.46□□□□□ -1.54
LdlrP35951 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.46□□□□□ -1.54
LdlrP35951 Gm7335-201ENSMUST00000172475 373 ntBASIC5.46□□□□□ -1.54
LdlrP35951 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LdlrP35951 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LdlrP35951 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC5.46□□□□□ -1.54
LdlrP35951 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LdlrP35951 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LdlrP35951 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LdlrP35951 Gm20871-201ENSMUST00000191322 931 ntBASIC5.46□□□□□ -1.54
LdlrP35951 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC5.46□□□□□ -1.54
LdlrP35951 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.46□□□□□ -1.54
LdlrP35951 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.46□□□□□ -1.54
LdlrP35951 Gm43345-201ENSMUST00000199484 269 ntBASIC5.46□□□□□ -1.54
LdlrP35951 Igkv13-82-201ENSMUST00000200308 346 ntBASIC5.46□□□□□ -1.54
LdlrP35951 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms