Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC4.27□□□□□ -1.73
P20040 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC4.27□□□□□ -1.73
P20040 Gm44038-201ENSMUST00000203952 889 ntBASIC4.27□□□□□ -1.73
P20040 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.27□□□□□ -1.73
P20040 Gm9512-201ENSMUST00000223112 497 ntBASIC4.27□□□□□ -1.73
P20040 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.27□□□□□ -1.73
P20040 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
P20040 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
P20040 Mir30b-201ENSMUST00000083542 96 ntBASIC4.27□□□□□ -1.73
P20040 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
P20040 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
P20040 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.27□□□□□ -1.73
P20040 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
P20040 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
P20040 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
P20040 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
P20040 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
P20040 Gm42455-201ENSMUST00000199761 2736 ntBASIC4.27□□□□□ -1.73
P20040 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.26□□□□□ -1.73
P20040 Gm12444-201ENSMUST00000121512 877 ntBASIC4.26□□□□□ -1.73
P20040 Gm15171-201ENSMUST00000122191 334 ntBASIC4.26□□□□□ -1.73
P20040 Gm25179-201ENSMUST00000122632 128 ntBASIC4.26□□□□□ -1.73
P20040 Gm16254-201ENSMUST00000131528 730 ntBASIC4.26□□□□□ -1.73
P20040 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.26□□□□□ -1.73
P20040 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
P20040 Gm22601-201ENSMUST00000157595 250 ntBASIC4.26□□□□□ -1.73
P20040 Gm23700-201ENSMUST00000158842 102 ntBASIC4.26□□□□□ -1.73
P20040 Gm6673-201ENSMUST00000166114 700 ntBASIC4.26□□□□□ -1.73
P20040 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC4.26□□□□□ -1.73
P20040 Gm27528-201ENSMUST00000183544 205 ntBASIC4.26□□□□□ -1.73
P20040 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
P20040 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
P20040 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.26□□□□□ -1.73
P20040 Gm18843-201ENSMUST00000194982 719 ntBASIC4.26□□□□□ -1.73
P20040 Gm42625-201ENSMUST00000198611 922 ntBASIC4.26□□□□□ -1.73
P20040 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC4.26□□□□□ -1.73
P20040 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC4.26□□□□□ -1.73
P20040 Gm43418-201ENSMUST00000201334 428 ntBASIC4.26□□□□□ -1.73
P20040 Gm19617-201ENSMUST00000202977 308 ntBASIC4.26□□□□□ -1.73
P20040 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
P20040 Gm44845-201ENSMUST00000208773 335 ntBASIC4.26□□□□□ -1.73
P20040 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC4.26□□□□□ -1.73
P20040 AC138284.2-201ENSMUST00000213982 567 ntBASIC4.26□□□□□ -1.73
P20040 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.26□□□□□ -1.73
P20040 Gm4057-201ENSMUST00000221407 368 ntBASIC4.26□□□□□ -1.73
P20040 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.26□□□□□ -1.73
P20040 AC123534.1-201ENSMUST00000224060 656 ntBASIC4.26□□□□□ -1.73
P20040 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
P20040 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
P20040 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
P20040 Snord15b-201ENSMUST00000083032 145 ntBASIC4.26□□□□□ -1.73
P20040 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
P20040 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
P20040 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.26□□□□□ -1.73
P20040 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
P20040 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
P20040 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.26□□□□□ -1.73
P20040 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
P20040 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
P20040 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.26□□□□□ -1.73
P20040 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
P20040 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.25□□□□□ -1.73
P20040 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
P20040 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
P20040 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.25□□□□□ -1.73
P20040 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
P20040 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
P20040 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
P20040 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
P20040 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
P20040 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
P20040 AC174797.3-203ENSMUST00000225749 2078 ntBASIC4.25□□□□□ -1.73
P20040 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
P20040 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
P20040 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
P20040 Gm23193-201ENSMUST00000102427 82 ntBASIC4.25□□□□□ -1.73
P20040 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
P20040 Gm16149-201ENSMUST00000117631 309 ntBASIC4.25□□□□□ -1.73
P20040 Gm14909-201ENSMUST00000117853 351 ntBASIC4.25□□□□□ -1.73
P20040 Gm5133-201ENSMUST00000118940 1255 ntBASIC4.25□□□□□ -1.73
P20040 Gm15357-201ENSMUST00000119160 285 ntBASIC4.25□□□□□ -1.73
P20040 Gm11790-201ENSMUST00000119569 455 ntBASIC4.25□□□□□ -1.73
P20040 Gm11510-201ENSMUST00000120278 347 ntBASIC4.25□□□□□ -1.73
P20040 Gm15390-201ENSMUST00000120323 738 ntBASIC4.25□□□□□ -1.73
P20040 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC4.25□□□□□ -1.73
P20040 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
P20040 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC4.25□□□□□ -1.73
P20040 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.25□□□□□ -1.73
P20040 Gm26354-201ENSMUST00000158221 129 ntBASIC4.25□□□□□ -1.73
P20040 Gm24675-201ENSMUST00000158757 259 ntBASIC4.25□□□□□ -1.73
P20040 Gm16134-201ENSMUST00000161714 336 ntBASIC4.25□□□□□ -1.73
P20040 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
P20040 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
P20040 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
P20040 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC4.25□□□□□ -1.73
P20040 Gm16456-201ENSMUST00000174431 920 ntBASIC4.25□□□□□ -1.73
P20040 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC4.25□□□□□ -1.73
P20040 Gm28957-201ENSMUST00000190174 373 ntBASIC4.25□□□□□ -1.73
P20040 Gm28769-201ENSMUST00000190176 615 ntBASIC4.25□□□□□ -1.73
P20040 Gm28060-201ENSMUST00000191554 189 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms