Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm18553-201ENSMUST00000194152 634 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Gm44456-201ENSMUST00000196554 89 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Gm43494-201ENSMUST00000197672 388 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Lire1P11260 Gm43973-201ENSMUST00000203562 210 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Gm7407-201ENSMUST00000208301 568 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Gm33601-201ENSMUST00000210001 961 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Gm6303-201ENSMUST00000210123 471 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Gm5339-201ENSMUST00000210551 1102 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Gm45249-201ENSMUST00000211021 348 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Lire1P11260 Gm17999-201ENSMUST00000211568 542 ntBASIC5.03□□□□□ -1.6
Lire1P11260 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Lire1P11260 AC106830.1-201ENSMUST00000228032 1003 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Gm6104-201ENSMUST00000078030 603 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lire1P11260 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lire1P11260 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lire1P11260 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lire1P11260 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Lire1P11260 AC154313.1-201ENSMUST00000217755 3841 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Lire1P11260 Gm38269-201ENSMUST00000194549 3298 ntBASIC5.03□□□□□ -1.6
Lire1P11260 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Lire1P11260 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.03□□□□□ -1.61
Lire1P11260 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Lire1P11260 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Lire1P11260 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lire1P11260 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.02□□□□□ -1.61
Lire1P11260 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lire1P11260 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Lire1P11260 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Lire1P11260 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lire1P11260 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Lire1P11260 Gm19335-201ENSMUST00000195836 2069 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Lire1P11260 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
Lire1P11260 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Lire1P11260 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Gm13488-201ENSMUST00000120419 179 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Gm12267-201ENSMUST00000121609 761 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Gm12685-201ENSMUST00000121702 214 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.02□□□□□ -1.61
Lire1P11260 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.02□□□□□ -1.61
Lire1P11260 Gm23702-201ENSMUST00000158840 130 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lire1P11260 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lire1P11260 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lire1P11260 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lire1P11260 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lire1P11260 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lire1P11260 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lire1P11260 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lire1P11260 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lire1P11260 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lire1P11260 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lire1P11260 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lire1P11260 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lire1P11260 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lire1P11260 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lire1P11260 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
Lire1P11260 Gm27355-201ENSMUST00000185045 128 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Lire1P11260 Gm28191-201ENSMUST00000189112 211 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC5.02□□□□□ -1.61
Lire1P11260 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC5.02□□□□□ -1.61
Lire1P11260 Gm37436-201ENSMUST00000193842 1085 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Gm44184-201ENSMUST00000204290 132 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Lire1P11260 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Lire1P11260 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Gm18205-201ENSMUST00000209215 841 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Gm8679-201ENSMUST00000210651 1036 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Gm20786-201ENSMUST00000212649 436 ntBASIC5.02□□□□□ -1.61
Lire1P11260 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC5.02□□□□□ -1.61
Lire1P11260 AC153801.1-201ENSMUST00000217904 947 ntBASIC5.02□□□□□ -1.61
Lire1P11260 AC132384.6-201ENSMUST00000218976 1206 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Gm6049-201ENSMUST00000222369 458 ntBASIC5.02□□□□□ -1.61
Lire1P11260 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.02□□□□□ -1.61
Lire1P11260 AC131745.2-201ENSMUST00000225736 565 ntBASIC5.02□□□□□ -1.61
Lire1P11260 AC132833.3-201ENSMUST00000227472 866 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lire1P11260 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lire1P11260 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Lire1P11260 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC5.02□□□□□ -1.61
Lire1P11260 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Lire1P11260 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Gm44860-201ENSMUST00000208473 2346 ntBASIC5.02□□□□□ -1.61
Lire1P11260 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Lire1P11260 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Lire1P11260 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 108.3 ms