Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.21
Gm4559A4IF42 AC154747.3-201ENSMUST00000224471 3470 ntBASIC1.28□□□□□ -2.21
Gm4559A4IF42 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Gm37924-201ENSMUST00000195470 3647 ntBASIC1.28□□□□□ -2.21
Gm4559A4IF42 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Tstd2-202ENSMUST00000107772 3726 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Snhg7os-202ENSMUST00000131841 3947 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC1.28□□□□□ -2.21
Gm4559A4IF42 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Gm42616-201ENSMUST00000198989 4184 ntBASIC1.28□□□□□ -2.21
Gm4559A4IF42 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
Gm4559A4IF42 Nr6a1-201ENSMUST00000076275 5941 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Ufm1-203ENSMUST00000146598 4890 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Slc2a12-201ENSMUST00000042261 4167 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Tnfaip1-201ENSMUST00000017759 3720 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Gm4559A4IF42 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Mthfd1-206ENSMUST00000220046 3040 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Qars-201ENSMUST00000006838 2800 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Ect2l-203ENSMUST00000207827 2730 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC1.27□□□□□ -2.21
Gm4559A4IF42 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC1.27□□□□□ -2.21
Gm4559A4IF42 AC164426.2-201ENSMUST00000225993 2492 ntBASIC1.27□□□□□ -2.21
Gm4559A4IF42 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Enthd1-201ENSMUST00000096347 2110 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Eef1g-201ENSMUST00000052248 1864 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Gm4559A4IF42 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC1.27□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms