Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Scn3aA2ASI5 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Scn3aA2ASI5 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Snord66-201ENSMUST00000104051 75 ntBASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Gm9308-201ENSMUST00000119073 448 ntBASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Gm15923-201ENSMUST00000119300 1169 ntBASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Llph-ps1-201ENSMUST00000121281 390 ntBASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Llph-ps2-201ENSMUST00000122000 393 ntBASIC5.09□□□□□ -1.59
Scn3aA2ASI5 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Gm28615-201ENSMUST00000187527 482 ntBASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Gm18183-201ENSMUST00000191024 615 ntBASIC5.09□□□□□ -1.59
Scn3aA2ASI5 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Gm44002-201ENSMUST00000205134 594 ntBASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Gm44852-201ENSMUST00000207950 369 ntBASIC5.09□□□□□ -1.59
Scn3aA2ASI5 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Gm38152-201ENSMUST00000195389 3566 ntBASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.09□□□□□ -1.59
Scn3aA2ASI5 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
Scn3aA2ASI5 Gm37696-201ENSMUST00000194223 3349 ntBASIC5.09□□□□□ -1.6
Scn3aA2ASI5 Gm24939-201ENSMUST00000158325 137 ntBASIC5.09□□□□□ -1.6
Scn3aA2ASI5 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.6
Scn3aA2ASI5 Gm27805-201ENSMUST00000184513 79 ntBASIC5.09□□□□□ -1.6
Scn3aA2ASI5 Gm18452-201ENSMUST00000202968 1111 ntBASIC5.09□□□□□ -1.6
Scn3aA2ASI5 Gm45359-201ENSMUST00000210635 427 ntBASIC5.09□□□□□ -1.6
Scn3aA2ASI5 Gm45608-201ENSMUST00000210948 389 ntBASIC5.09□□□□□ -1.6
Scn3aA2ASI5 Gm7093-201ENSMUST00000223004 581 ntBASIC5.09□□□□□ -1.6
Scn3aA2ASI5 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC5.09□□□□□ -1.6
Scn3aA2ASI5 AC159231.1-201ENSMUST00000225365 226 ntBASIC5.09□□□□□ -1.6
Scn3aA2ASI5 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.09□□□□□ -1.6
Scn3aA2ASI5 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.09□□□□□ -1.6
Scn3aA2ASI5 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.6
Scn3aA2ASI5 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Scn3aA2ASI5 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.08□□□□□ -1.6
Scn3aA2ASI5 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Scn3aA2ASI5 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Scn3aA2ASI5 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.08□□□□□ -1.6
Scn3aA2ASI5 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.08□□□□□ -1.6
Scn3aA2ASI5 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Scn3aA2ASI5 Gm5942-201ENSMUST00000120046 439 ntBASIC5.08□□□□□ -1.6
Scn3aA2ASI5 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC5.08□□□□□ -1.6
Scn3aA2ASI5 Gm15057-201ENSMUST00000121516 534 ntBASIC5.08□□□□□ -1.6
Scn3aA2ASI5 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC5.08□□□□□ -1.6
Scn3aA2ASI5 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.08□□□□□ -1.6
Scn3aA2ASI5 Gm21070-201ENSMUST00000182425 985 ntBASIC5.08□□□□□ -1.6
Scn3aA2ASI5 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.08□□□□□ -1.6
Scn3aA2ASI5 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Scn3aA2ASI5 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Scn3aA2ASI5 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Scn3aA2ASI5 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Scn3aA2ASI5 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Scn3aA2ASI5 Gm43781-201ENSMUST00000197634 2681 ntBASIC5.08□□□□□ -1.6
Scn3aA2ASI5 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Scn3aA2ASI5 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Gm23481-201ENSMUST00000104173 131 ntBASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Gm18877-201ENSMUST00000207706 539 ntBASIC5.07□□□□□ -1.6
Scn3aA2ASI5 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Gm45458-201ENSMUST00000209900 522 ntBASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Synpr-207ENSMUST00000223583 3362 ntBASIC5.07□□□□□ -1.6
Scn3aA2ASI5 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Gm14916-201ENSMUST00000121904 204 ntBASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Gm5963-201ENSMUST00000143451 236 ntBASIC5.07□□□□□ -1.6
Scn3aA2ASI5 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC5.07□□□□□ -1.6
Scn3aA2ASI5 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Scn3aA2ASI5 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms