Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm29000-201ENSMUST00000185444 614 ntBASIC4.75□□□□□ -1.65
Scn1aA2APX8 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC4.75□□□□□ -1.65
Scn1aA2APX8 Gm28204-201ENSMUST00000185934 614 ntBASIC4.75□□□□□ -1.65
Scn1aA2APX8 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Scn1aA2APX8 Gm28290-201ENSMUST00000186505 614 ntBASIC4.75□□□□□ -1.65
Scn1aA2APX8 Gm28161-201ENSMUST00000186669 614 ntBASIC4.75□□□□□ -1.65
Scn1aA2APX8 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.75□□□□□ -1.65
Scn1aA2APX8 Gm28749-209ENSMUST00000189599 614 ntBASIC4.75□□□□□ -1.65
Scn1aA2APX8 Gm33163-201ENSMUST00000194504 614 ntBASIC4.75□□□□□ -1.65
Scn1aA2APX8 Gm8861-201ENSMUST00000196346 832 ntBASIC4.75□□□□□ -1.65
Scn1aA2APX8 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Scn1aA2APX8 Gm40598-201ENSMUST00000222953 547 ntBASIC4.75□□□□□ -1.65
Scn1aA2APX8 AC139758.1-201ENSMUST00000226573 930 ntBASIC4.75□□□□□ -1.65
Scn1aA2APX8 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Scn1aA2APX8 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Scn1aA2APX8 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Scn1aA2APX8 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.75□□□□□ -1.65
Scn1aA2APX8 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Scn1aA2APX8 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.75□□□□□ -1.65
Scn1aA2APX8 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Scn1aA2APX8 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Scn1aA2APX8 Gm12062-201ENSMUST00000117533 259 ntBASIC4.75□□□□□ -1.65
Scn1aA2APX8 Gm14854-201ENSMUST00000117758 841 ntBASIC4.75□□□□□ -1.65
Scn1aA2APX8 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Scn1aA2APX8 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.75□□□□□ -1.65
Scn1aA2APX8 Gm16250-201ENSMUST00000148974 256 ntBASIC4.75□□□□□ -1.65
Scn1aA2APX8 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC4.75□□□□□ -1.65
Scn1aA2APX8 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.75□□□□□ -1.65
Scn1aA2APX8 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.75□□□□□ -1.65
Scn1aA2APX8 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.75□□□□□ -1.65
Scn1aA2APX8 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Scn1aA2APX8 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Scn1aA2APX8 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.75□□□□□ -1.65
Scn1aA2APX8 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Scn1aA2APX8 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC4.74□□□□□ -1.65
Scn1aA2APX8 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC4.74□□□□□ -1.65
Scn1aA2APX8 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Scn1aA2APX8 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Scn1aA2APX8 Gm25726-201ENSMUST00000104529 129 ntBASIC4.74□□□□□ -1.65
Scn1aA2APX8 Gm16285-201ENSMUST00000162999 347 ntBASIC4.74□□□□□ -1.65
Scn1aA2APX8 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Scn1aA2APX8 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Scn1aA2APX8 Gm27611-201ENSMUST00000184690 108 ntBASIC4.74□□□□□ -1.65
Scn1aA2APX8 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Scn1aA2APX8 Gm19131-201ENSMUST00000203408 789 ntBASIC4.74□□□□□ -1.65
Scn1aA2APX8 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC4.74□□□□□ -1.65
Scn1aA2APX8 Gm18377-201ENSMUST00000215141 607 ntBASIC4.74□□□□□ -1.65
Scn1aA2APX8 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Scn1aA2APX8 Gm23875-201ENSMUST00000083711 318 ntBASIC4.74□□□□□ -1.65
Scn1aA2APX8 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Scn1aA2APX8 Gm44027-201ENSMUST00000203419 3480 ntBASIC4.74□□□□□ -1.65
Scn1aA2APX8 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.74□□□□□ -1.65
Scn1aA2APX8 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.74□□□□□ -1.65
Scn1aA2APX8 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Scn1aA2APX8 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
Scn1aA2APX8 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Scn1aA2APX8 Gm23178-201ENSMUST00000116782 95 ntBASIC4.73□□□□□ -1.65
Scn1aA2APX8 Gm15385-201ENSMUST00000118725 667 ntBASIC4.73□□□□□ -1.65
Scn1aA2APX8 Gm12190-201ENSMUST00000120001 187 ntBASIC4.73□□□□□ -1.65
Scn1aA2APX8 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Gm43710-201ENSMUST00000199583 452 ntBASIC4.73□□□□□ -1.65
Scn1aA2APX8 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.73□□□□□ -1.65
Scn1aA2APX8 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC4.73□□□□□ -1.65
Scn1aA2APX8 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Gm13232-201ENSMUST00000121816 632 ntBASIC4.73□□□□□ -1.65
Scn1aA2APX8 Gm22726-201ENSMUST00000158089 179 ntBASIC4.73□□□□□ -1.65
Scn1aA2APX8 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Gm8221-201ENSMUST00000178052 564 ntBASIC4.73□□□□□ -1.65
Scn1aA2APX8 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Gm37966-201ENSMUST00000193122 326 ntBASIC4.73□□□□□ -1.65
Scn1aA2APX8 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Gm45081-201ENSMUST00000206281 572 ntBASIC4.73□□□□□ -1.65
Scn1aA2APX8 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC4.73□□□□□ -1.65
Scn1aA2APX8 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.73□□□□□ -1.65
Scn1aA2APX8 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.73□□□□□ -1.65
Scn1aA2APX8 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Scn1aA2APX8 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.73□□□□□ -1.65
Scn1aA2APX8 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Scn1aA2APX8 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Scn1aA2APX8 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Scn1aA2APX8 AC159193.1-201ENSMUST00000222872 2517 ntBASIC4.72□□□□□ -1.65
Scn1aA2APX8 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms