Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm8321-201ENSMUST00000181691 980 ntBASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm8669-201ENSMUST00000183839 945 ntBASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm27160-201ENSMUST00000184837 199 ntBASIC4.6□□□□□ -1.67
Lima1Q9ERG0 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm6366-201ENSMUST00000198766 826 ntBASIC4.6□□□□□ -1.67
Lima1Q9ERG0 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm43276-201ENSMUST00000199712 364 ntBASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm17811-201ENSMUST00000206193 387 ntBASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm4574-201ENSMUST00000207804 542 ntBASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm45498-201ENSMUST00000210346 283 ntBASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 AC121137.1-201ENSMUST00000225272 602 ntBASIC4.6□□□□□ -1.67
Lima1Q9ERG0 AC133517.2-201ENSMUST00000226820 690 ntBASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Olfr654-201ENSMUST00000098173 1155 ntBASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Lima1Q9ERG0 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.6□□□□□ -1.67
Lima1Q9ERG0 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Gm12978-201ENSMUST00000121250 522 ntBASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Gm16345-201ENSMUST00000146065 158 ntBASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Gm23534-201ENSMUST00000157539 97 ntBASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Gm25447-201ENSMUST00000158997 128 ntBASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Gm7335-201ENSMUST00000172475 373 ntBASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Mir7235-201ENSMUST00000183796 56 ntBASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC4.59□□□□□ -1.67
Lima1Q9ERG0 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Gm43712-201ENSMUST00000198020 291 ntBASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Gm43418-201ENSMUST00000201334 428 ntBASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Gm2522-201ENSMUST00000204280 322 ntBASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Gm44648-201ENSMUST00000208267 329 ntBASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Gm45269-201ENSMUST00000210359 282 ntBASIC4.59□□□□□ -1.67
Lima1Q9ERG0 AC154296.3-201ENSMUST00000214427 712 ntBASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Gm46138-201ENSMUST00000215294 426 ntBASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.59□□□□□ -1.67
Lima1Q9ERG0 AC161114.1-201ENSMUST00000218223 474 ntBASIC4.59□□□□□ -1.67
Lima1Q9ERG0 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC4.59□□□□□ -1.67
Lima1Q9ERG0 AC140299.2-201ENSMUST00000219546 1969 ntBASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Gm40692-201ENSMUST00000220411 491 ntBASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Gm6049-201ENSMUST00000222369 458 ntBASIC4.59□□□□□ -1.67
Lima1Q9ERG0 AC187103.2-201ENSMUST00000223605 1617 ntBASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
Lima1Q9ERG0 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.59□□□□□ -1.67
Lima1Q9ERG0 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Lima1Q9ERG0 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.68
Lima1Q9ERG0 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
Lima1Q9ERG0 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.68
Lima1Q9ERG0 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Gm11822-201ENSMUST00000119177 415 ntBASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Gm23496-201ENSMUST00000157741 248 ntBASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Gm24675-201ENSMUST00000158757 259 ntBASIC4.58□□□□□ -1.68
Lima1Q9ERG0 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Lima1Q9ERG0 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms