Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm14046-201ENSMUST00000119389 509 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Gm12007-201ENSMUST00000120978 597 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Gm15388-201ENSMUST00000121578 726 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Gm7973-201ENSMUST00000122107 488 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Gm15274-201ENSMUST00000131442 291 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Gm21979-201ENSMUST00000139887 291 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.22□□□□□ -1.57
Vps28Q9D1C8 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Gm15259-201ENSMUST00000151262 291 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Gm25966-201ENSMUST00000157169 117 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Gm17152-201ENSMUST00000172430 535 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Gm20397-201ENSMUST00000174520 362 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Mir1264-201ENSMUST00000175381 86 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Gm6717-201ENSMUST00000185549 838 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Vps28Q9D1C8 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.22□□□□□ -1.57
Vps28Q9D1C8 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Vps28Q9D1C8 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Gm44184-201ENSMUST00000204290 132 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Gm21089-201ENSMUST00000215843 325 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.22□□□□□ -1.57
Vps28Q9D1C8 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 AC116724.1-201ENSMUST00000227900 972 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 CT025525.3-201ENSMUST00000228858 366 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 AC124408.1-201ENSMUST00000228938 707 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Gm24144-201ENSMUST00000082632 111 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Gm25799-201ENSMUST00000082643 107 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Gm24319-201ENSMUST00000083389 107 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Gm22444-201ENSMUST00000093693 108 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.22□□□□□ -1.57
Vps28Q9D1C8 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.21□□□□□ -1.57
Vps28Q9D1C8 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Vps28Q9D1C8 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm3835-201ENSMUST00000120752 403 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.21□□□□□ -1.58
Vps28Q9D1C8 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm24441-201ENSMUST00000157235 281 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm22529-201ENSMUST00000158817 123 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm16300-201ENSMUST00000160031 1279 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm6632-201ENSMUST00000168425 954 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm25525-201ENSMUST00000177701 107 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm26178-201ENSMUST00000177706 107 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm26465-201ENSMUST00000178517 107 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm24317-201ENSMUST00000178536 107 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm25021-201ENSMUST00000179184 107 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm22995-201ENSMUST00000179670 107 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm24424-201ENSMUST00000179714 107 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm24389-201ENSMUST00000179962 107 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm25672-201ENSMUST00000180111 107 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Mir6903-201ENSMUST00000183597 88 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm29163-201ENSMUST00000188029 107 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm20954-201ENSMUST00000189078 644 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm37193-201ENSMUST00000193087 513 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm2623-201ENSMUST00000199229 286 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm7721-201ENSMUST00000200446 546 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm43531-201ENSMUST00000200676 1114 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm7825-201ENSMUST00000204046 416 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm44820-201ENSMUST00000207420 396 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.21□□□□□ -1.58
Vps28Q9D1C8 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm18924-201ENSMUST00000211929 316 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC5.21□□□□□ -1.58
Vps28Q9D1C8 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Gm272-201ENSMUST00000222073 919 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 AC156559.1-201ENSMUST00000224158 222 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.21□□□□□ -1.58
Vps28Q9D1C8 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms