Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ddx56Q9D0R4 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ddx56Q9D0R4 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
Ddx56Q9D0R4 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ddx56Q9D0R4 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.82□□□□□ -1.48
Ddx56Q9D0R4 Gm20679-201ENSMUST00000177285 1402 ntBASIC5.82□□□□□ -1.48
Ddx56Q9D0R4 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ddx56Q9D0R4 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm42534-201ENSMUST00000196063 1754 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm6429-201ENSMUST00000117144 475 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm11898-201ENSMUST00000117161 385 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm14365-201ENSMUST00000117535 587 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm14854-201ENSMUST00000117758 841 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm15403-201ENSMUST00000119343 1227 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm16200-201ENSMUST00000120385 331 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm11252-201ENSMUST00000120572 939 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm23111-201ENSMUST00000122652 105 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm23883-201ENSMUST00000122686 290 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm25979-201ENSMUST00000157177 138 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Mup-ps7-201ENSMUST00000178292 545 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Mup-ps8-201ENSMUST00000178663 545 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Mup-ps9-201ENSMUST00000178847 545 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Mup-ps6-201ENSMUST00000179564 545 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm37203-201ENSMUST00000191618 385 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm38333-201ENSMUST00000193608 604 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm43516-201ENSMUST00000196891 322 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm16335-201ENSMUST00000077495 309 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm21286-201ENSMUST00000098035 545 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 AC124586.1-201ENSMUST00000221673 2795 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Ddx56Q9D0R4 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 AC152981.1-201ENSMUST00000218320 2480 ntBASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Gm26078-201ENSMUST00000104067 128 ntBASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Gm11914-201ENSMUST00000117094 507 ntBASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Gm13890-201ENSMUST00000117578 390 ntBASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Gm11699-201ENSMUST00000119016 401 ntBASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Gm12482-201ENSMUST00000120435 630 ntBASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Gm22345-201ENSMUST00000122644 107 ntBASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Gm4660-201ENSMUST00000131499 403 ntBASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC5.8□□□□□ -1.48
Ddx56Q9D0R4 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms