Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm24065-201ENSMUST00000157487 264 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm26352-201ENSMUST00000158223 125 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm22158-201ENSMUST00000158411 126 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Mir3058-201ENSMUST00000175126 91 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Mir3060-201ENSMUST00000175339 83 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm21991-201ENSMUST00000180006 508 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm27492-201ENSMUST00000185194 187 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm29159-201ENSMUST00000187969 379 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm44779-201ENSMUST00000206937 708 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm19170-201ENSMUST00000212440 1084 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 AC079644.1-201ENSMUST00000220586 405 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm46996-201ENSMUST00000220924 408 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC4.52□□□□□ -1.69
Use1Q9CQ56 AC153153.2-201ENSMUST00000223572 411 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 AC161884.2-201ENSMUST00000224513 227 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 CT030662.3-201ENSMUST00000228751 476 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm24166-201ENSMUST00000082724 135 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm29293-201ENSMUST00000189416 2188 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm37124-201ENSMUST00000192140 1992 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Use1Q9CQ56 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Use1Q9CQ56 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Use1Q9CQ56 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Use1Q9CQ56 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.51□□□□□ -1.69
Use1Q9CQ56 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.51□□□□□ -1.69
Use1Q9CQ56 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Use1Q9CQ56 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Use1Q9CQ56 Gm13250-201ENSMUST00000117209 753 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 Gm4853-201ENSMUST00000119359 394 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 Gm13532-201ENSMUST00000120373 240 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 Gm13488-201ENSMUST00000120419 179 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 Gm15166-201ENSMUST00000120790 385 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Use1Q9CQ56 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Use1Q9CQ56 Gm27602-201ENSMUST00000183861 111 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 Mir6973b-201ENSMUST00000184185 80 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC4.51□□□□□ -1.69
Use1Q9CQ56 Gm7266-201ENSMUST00000187999 405 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 Gm28116-201ENSMUST00000189064 387 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 Gm37837-201ENSMUST00000191743 604 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC4.51□□□□□ -1.69
Use1Q9CQ56 Gm43408-201ENSMUST00000198263 440 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.51□□□□□ -1.69
Use1Q9CQ56 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Use1Q9CQ56 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 Gm9038-201ENSMUST00000203400 604 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 Gm43922-201ENSMUST00000205071 328 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 Gm45026-201ENSMUST00000205292 833 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Use1Q9CQ56 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC4.51□□□□□ -1.69
Use1Q9CQ56 Gm19189-201ENSMUST00000221689 754 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 Gm9512-201ENSMUST00000223112 497 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 AC159256.1-201ENSMUST00000224298 1039 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 CT030194.2-201ENSMUST00000225752 379 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Use1Q9CQ56 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Use1Q9CQ56 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Use1Q9CQ56 Gm23330-201ENSMUST00000082660 164 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 Gm22741-201ENSMUST00000083438 165 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Use1Q9CQ56 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.51□□□□□ -1.69
Use1Q9CQ56 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.51□□□□□ -1.69
Use1Q9CQ56 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Use1Q9CQ56 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Use1Q9CQ56 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.5□□□□□ -1.69
Use1Q9CQ56 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Use1Q9CQ56 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
Use1Q9CQ56 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms