Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm24435-201ENSMUST00000157886 110 ntBASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm22650-201ENSMUST00000175138 105 ntBASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm21756-201ENSMUST00000178380 930 ntBASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm21405-201ENSMUST00000179024 930 ntBASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm29299-201ENSMUST00000185609 923 ntBASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm21191-201ENSMUST00000186484 930 ntBASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm29600-201ENSMUST00000188687 377 ntBASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm29573-201ENSMUST00000190291 919 ntBASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm28211-201ENSMUST00000190920 315 ntBASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm29503-201ENSMUST00000191044 930 ntBASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm37430-201ENSMUST00000193039 196 ntBASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Igkv12-67-201ENSMUST00000197806 354 ntBASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Amd-ps5-201ENSMUST00000198406 989 ntBASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm43841-201ENSMUST00000199491 586 ntBASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm43418-201ENSMUST00000201334 428 ntBASIC5.56□□□□□ -1.52
Trim8Q99PJ2 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 AC154467.1-201ENSMUST00000227527 449 ntBASIC5.56□□□□□ -1.52
Trim8Q99PJ2 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm7887-201ENSMUST00000056948 537 ntBASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm23846-201ENSMUST00000083835 107 ntBASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.56□□□□□ -1.52
Trim8Q99PJ2 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim8Q99PJ2 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms