Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Msh4Q99MT2 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Msh4Q99MT2 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Msh4Q99MT2 Gm44678-201ENSMUST00000207828 2775 ntBASIC5.11□□□□□ -1.59
Msh4Q99MT2 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Msh4Q99MT2 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
Msh4Q99MT2 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Msh4Q99MT2 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Msh4Q99MT2 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Msh4Q99MT2 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Msh4Q99MT2 Gm7754-201ENSMUST00000223075 2064 ntBASIC5.11□□□□□ -1.59
Msh4Q99MT2 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Msh4Q99MT2 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Msh4Q99MT2 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.11□□□□□ -1.59
Msh4Q99MT2 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Msh4Q99MT2 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
Msh4Q99MT2 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.1□□□□□ -1.59
Msh4Q99MT2 Gm14913-201ENSMUST00000120011 1093 ntBASIC5.1□□□□□ -1.59
Msh4Q99MT2 Gm13508-201ENSMUST00000121639 775 ntBASIC5.1□□□□□ -1.59
Msh4Q99MT2 Gm11759-201ENSMUST00000121742 464 ntBASIC5.1□□□□□ -1.59
Msh4Q99MT2 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Gm11197-201ENSMUST00000145158 839 ntBASIC5.1□□□□□ -1.59
Msh4Q99MT2 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Gm26350-201ENSMUST00000157531 288 ntBASIC5.1□□□□□ -1.59
Msh4Q99MT2 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.1□□□□□ -1.59
Msh4Q99MT2 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.1□□□□□ -1.59
Msh4Q99MT2 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Mrgpra14-201ENSMUST00000189782 913 ntBASIC5.1□□□□□ -1.59
Msh4Q99MT2 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.1□□□□□ -1.59
Msh4Q99MT2 Gm37700-201ENSMUST00000192617 965 ntBASIC5.1□□□□□ -1.59
Msh4Q99MT2 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Gm37407-201ENSMUST00000194793 1316 ntBASIC5.1□□□□□ -1.59
Msh4Q99MT2 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.1□□□□□ -1.59
Msh4Q99MT2 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Gm7688-201ENSMUST00000212857 337 ntBASIC5.1□□□□□ -1.59
Msh4Q99MT2 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Gm5176-201ENSMUST00000218244 1227 ntBASIC5.1□□□□□ -1.59
Msh4Q99MT2 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.1□□□□□ -1.59
Msh4Q99MT2 AV026068-231ENSMUST00000225862 482 ntBASIC5.1□□□□□ -1.59
Msh4Q99MT2 AC154738.1-201ENSMUST00000227054 368 ntBASIC5.1□□□□□ -1.59
Msh4Q99MT2 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Gm22456-201ENSMUST00000082578 125 ntBASIC5.1□□□□□ -1.59
Msh4Q99MT2 Gm23459-201ENSMUST00000083259 131 ntBASIC5.1□□□□□ -1.59
Msh4Q99MT2 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Smc5-206ENSMUST00000226111 3265 ntBASIC5.1□□□□□ -1.59
Msh4Q99MT2 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Msh4Q99MT2 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Msh4Q99MT2 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.09□□□□□ -1.59
Msh4Q99MT2 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.09□□□□□ -1.59
Msh4Q99MT2 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.09□□□□□ -1.59
Msh4Q99MT2 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Msh4Q99MT2 Gm43369-201ENSMUST00000196373 1552 ntBASIC5.09□□□□□ -1.59
Msh4Q99MT2 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Msh4Q99MT2 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Msh4Q99MT2 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Msh4Q99MT2 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Msh4Q99MT2 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Msh4Q99MT2 AC164297.4-201ENSMUST00000224225 1307 ntBASIC5.09□□□□□ -1.59
Msh4Q99MT2 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Msh4Q99MT2 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
Msh4Q99MT2 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.09□□□□□ -1.59
Msh4Q99MT2 Gm11984-201ENSMUST00000118142 766 ntBASIC5.09□□□□□ -1.59
Msh4Q99MT2 Gm11975-201ENSMUST00000118772 481 ntBASIC5.09□□□□□ -1.59
Msh4Q99MT2 Gm15803-201ENSMUST00000120118 394 ntBASIC5.09□□□□□ -1.59
Msh4Q99MT2 Gm13488-201ENSMUST00000120419 179 ntBASIC5.09□□□□□ -1.59
Msh4Q99MT2 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.09□□□□□ -1.59
Msh4Q99MT2 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC5.09□□□□□ -1.59
Msh4Q99MT2 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC5.09□□□□□ -1.59
Msh4Q99MT2 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Msh4Q99MT2 Gm25824-201ENSMUST00000157092 121 ntBASIC5.09□□□□□ -1.59
Msh4Q99MT2 Gm25861-201ENSMUST00000158251 109 ntBASIC5.09□□□□□ -1.59
Msh4Q99MT2 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
Msh4Q99MT2 Gm6673-201ENSMUST00000166114 700 ntBASIC5.09□□□□□ -1.59
Msh4Q99MT2 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.09□□□□□ -1.59
Msh4Q99MT2 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Msh4Q99MT2 Gm27541-201ENSMUST00000184078 122 ntBASIC5.09□□□□□ -1.59
Msh4Q99MT2 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Msh4Q99MT2 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC5.09□□□□□ -1.59
Msh4Q99MT2 Gm37438-201ENSMUST00000192813 393 ntBASIC5.09□□□□□ -1.59
Msh4Q99MT2 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Msh4Q99MT2 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Msh4Q99MT2 Gm8719-201ENSMUST00000203602 534 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms