Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm11584-201ENSMUST00000120636 325 ntBASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Gm8061-201ENSMUST00000122380 350 ntBASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Gm25293-201ENSMUST00000122792 285 ntBASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Gm16557-201ENSMUST00000159182 191 ntBASIC3.71□□□□□ -1.82
Nup35Q8R4R6 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Gm7152-201ENSMUST00000163570 605 ntBASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Gm5558-201ENSMUST00000178933 495 ntBASIC3.71□□□□□ -1.82
Nup35Q8R4R6 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Gm6546-201ENSMUST00000192096 766 ntBASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Gm39197-201ENSMUST00000212069 457 ntBASIC3.71□□□□□ -1.82
Nup35Q8R4R6 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC3.71□□□□□ -1.82
Nup35Q8R4R6 AC131745.1-201ENSMUST00000223660 330 ntBASIC3.71□□□□□ -1.82
Nup35Q8R4R6 AC157572.4-201ENSMUST00000228203 549 ntBASIC3.71□□□□□ -1.82
Nup35Q8R4R6 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 n-R5s168-201ENSMUST00000083948 104 ntBASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Gm6043-201ENSMUST00000099961 492 ntBASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 AC159308.1-201ENSMUST00000216615 1351 ntBASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Gm37412-201ENSMUST00000194866 4321 ntBASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Gm38032-201ENSMUST00000195052 1589 ntBASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Gm42616-201ENSMUST00000198989 4184 ntBASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nup35Q8R4R6 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm38057-201ENSMUST00000195551 3203 ntBASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC3.7□□□□□ -1.82
Nup35Q8R4R6 AC103672.3-201ENSMUST00000227649 3243 ntBASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm25758-201ENSMUST00000103987 129 ntBASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm23910-201ENSMUST00000104597 132 ntBASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Mir105-201ENSMUST00000104655 80 ntBASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm12261-201ENSMUST00000117499 645 ntBASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm9429-201ENSMUST00000117804 868 ntBASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm3943-201ENSMUST00000118606 718 ntBASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm13815-201ENSMUST00000119963 412 ntBASIC3.7□□□□□ -1.82
Nup35Q8R4R6 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm25389-201ENSMUST00000157340 286 ntBASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm24774-201ENSMUST00000157384 134 ntBASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm6214-201ENSMUST00000178845 541 ntBASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm28263-201ENSMUST00000185884 400 ntBASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm37601-201ENSMUST00000194922 394 ntBASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm7825-201ENSMUST00000204046 416 ntBASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm46192-201ENSMUST00000217894 326 ntBASIC3.7□□□□□ -1.82
Nup35Q8R4R6 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 AC164437.2-201ENSMUST00000228915 797 ntBASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Mir99a-201ENSMUST00000083596 65 ntBASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Gm36298-201ENSMUST00000223394 1732 ntBASIC3.7□□□□□ -1.82
Nup35Q8R4R6 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
Nup35Q8R4R6 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms