Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm23942-201ENSMUST00000101956 107 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm11804-201ENSMUST00000121663 468 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm25846-201ENSMUST00000158013 135 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm24768-201ENSMUST00000158512 94 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm21959-201ENSMUST00000178439 452 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm27039-201ENSMUST00000182438 962 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm27155-201ENSMUST00000183716 898 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm6137-201ENSMUST00000187552 578 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm37491-201ENSMUST00000192552 1111 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm34176-201ENSMUST00000192621 474 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Ighv1-3-201ENSMUST00000192764 302 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm17967-201ENSMUST00000195319 647 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm29813-201ENSMUST00000195856 447 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm44431-201ENSMUST00000203500 413 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm31532-201ENSMUST00000203555 767 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm44773-201ENSMUST00000207374 557 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm6850-201ENSMUST00000210031 530 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm18904-201ENSMUST00000218756 329 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 AC153532.2-201ENSMUST00000219753 3844 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm272-201ENSMUST00000222073 919 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Clec2j-201ENSMUST00000032517 515 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Olfr192-201ENSMUST00000080251 925 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 AC131329.1-201ENSMUST00000221204 3487 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 AC153144.1-201ENSMUST00000221759 3139 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm42686-201ENSMUST00000199172 4108 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm37407-201ENSMUST00000194793 1316 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Gm43466-201ENSMUST00000197836 5214 ntBASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Brf1Q8CFK2 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Gm37767-201ENSMUST00000193239 1834 ntBASIC6.18□□□□□ -1.42
Brf1Q8CFK2 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Mir711-201ENSMUST00000102188 82 ntBASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Mir466f-2-201ENSMUST00000104805 94 ntBASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Brf1Q8CFK2 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Defa-ps1-201ENSMUST00000119062 282 ntBASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Gm15034-201ENSMUST00000120043 349 ntBASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Gm13435-201ENSMUST00000120111 1023 ntBASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Gm13452-201ENSMUST00000120896 1097 ntBASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Defa-ps6-201ENSMUST00000122172 282 ntBASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Gm16363-201ENSMUST00000132460 877 ntBASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC6.18□□□□□ -1.42
Brf1Q8CFK2 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Gm25824-201ENSMUST00000157092 121 ntBASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Gm25907-201ENSMUST00000158486 125 ntBASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Mir6343-201ENSMUST00000183584 84 ntBASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Gm36966-201ENSMUST00000192217 413 ntBASIC6.18□□□□□ -1.42
Brf1Q8CFK2 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC6.18□□□□□ -1.42
Brf1Q8CFK2 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Gm2142-201ENSMUST00000197899 589 ntBASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Gm19065-202ENSMUST00000203910 1165 ntBASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Gm44623-201ENSMUST00000207934 434 ntBASIC6.18□□□□□ -1.42
Brf1Q8CFK2 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Brf1Q8CFK2 AC151843.1-201ENSMUST00000215960 691 ntBASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Gm19256-201ENSMUST00000218550 231 ntBASIC6.18□□□□□ -1.42
Brf1Q8CFK2 AC157515.1-201ENSMUST00000220953 450 ntBASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Brf1Q8CFK2 AC164116.2-201ENSMUST00000225398 1038 ntBASIC6.18□□□□□ -1.42
Brf1Q8CFK2 AC116395.1-201ENSMUST00000225480 1143 ntBASIC6.18□□□□□ -1.42
Brf1Q8CFK2 AC166574.3-201ENSMUST00000226725 367 ntBASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Brf1Q8CFK2 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms