Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC4.78□□□□□ -1.64
Ccdc28aQ8CEI3 Gm8145-201ENSMUST00000118220 745 ntBASIC4.78□□□□□ -1.64
Ccdc28aQ8CEI3 Gm12231-201ENSMUST00000119447 695 ntBASIC4.78□□□□□ -1.64
Ccdc28aQ8CEI3 Gm25103-201ENSMUST00000122671 318 ntBASIC4.78□□□□□ -1.64
Ccdc28aQ8CEI3 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC4.78□□□□□ -1.64
Ccdc28aQ8CEI3 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc28aQ8CEI3 Gm17044-201ENSMUST00000168549 828 ntBASIC4.78□□□□□ -1.64
Ccdc28aQ8CEI3 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC4.78□□□□□ -1.64
Ccdc28aQ8CEI3 Gm3307-201ENSMUST00000176164 632 ntBASIC4.78□□□□□ -1.64
Ccdc28aQ8CEI3 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.78□□□□□ -1.64
Ccdc28aQ8CEI3 Mir6973b-201ENSMUST00000184185 80 ntBASIC4.78□□□□□ -1.64
Ccdc28aQ8CEI3 Mrgprb13-201ENSMUST00000188191 985 ntBASIC4.78□□□□□ -1.64
Ccdc28aQ8CEI3 Gm44054-201ENSMUST00000203814 372 ntBASIC4.78□□□□□ -1.64
Ccdc28aQ8CEI3 Gm45157-201ENSMUST00000208729 401 ntBASIC4.78□□□□□ -1.64
Ccdc28aQ8CEI3 AC125399.1-201ENSMUST00000224236 595 ntBASIC4.78□□□□□ -1.64
Ccdc28aQ8CEI3 AC133517.2-201ENSMUST00000226820 690 ntBASIC4.78□□□□□ -1.64
Ccdc28aQ8CEI3 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
Ccdc28aQ8CEI3 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.78□□□□□ -1.64
Ccdc28aQ8CEI3 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ccdc28aQ8CEI3 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc28aQ8CEI3 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ccdc28aQ8CEI3 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc28aQ8CEI3 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc28aQ8CEI3 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Gm3267-201ENSMUST00000118671 473 ntBASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Gm8051-201ENSMUST00000120464 466 ntBASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Gm12650-201ENSMUST00000121966 258 ntBASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Gm17152-201ENSMUST00000172430 535 ntBASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Gm37601-201ENSMUST00000194922 394 ntBASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Gm8929-201ENSMUST00000197781 1132 ntBASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 AC122301.1-201ENSMUST00000219625 507 ntBASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 AC152169.2-201ENSMUST00000224558 613 ntBASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 AC154583.1-201ENSMUST00000224788 655 ntBASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 AC154724.1-201ENSMUST00000225782 821 ntBASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc28aQ8CEI3 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Gm10552-201ENSMUST00000113396 372 ntBASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Gm15073-201ENSMUST00000117432 634 ntBASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Gm5133-201ENSMUST00000118940 1255 ntBASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Gm13690-201ENSMUST00000118989 285 ntBASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Gm15971-201ENSMUST00000119372 211 ntBASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Gm13537-201ENSMUST00000120467 267 ntBASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Gm6031-201ENSMUST00000121314 1054 ntBASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Gm14500-201ENSMUST00000121647 113 ntBASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Gm16345-201ENSMUST00000146065 158 ntBASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Mir6343-201ENSMUST00000183584 84 ntBASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Gm27551-201ENSMUST00000184258 77 ntBASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Vmn1r82-202ENSMUST00000191002 918 ntBASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Gm8319-201ENSMUST00000205708 641 ntBASIC4.76□□□□□ -1.65
Ccdc28aQ8CEI3 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC4.76□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms