Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 Gm24435-201ENSMUST00000157886 110 ntBASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 Gm25456-201ENSMUST00000157952 109 ntBASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc28bQ8CEG5 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm43341-201ENSMUST00000200104 1308 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Synpr-207ENSMUST00000223583 3362 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm22231-201ENSMUST00000101027 73 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm12379-201ENSMUST00000119607 391 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm12936-201ENSMUST00000121439 301 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm12005-201ENSMUST00000121451 379 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm11759-201ENSMUST00000121742 464 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm16259-201ENSMUST00000145241 553 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm24940-201ENSMUST00000158326 108 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm7316-201ENSMUST00000165395 445 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm9457-201ENSMUST00000180176 372 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm27210-201ENSMUST00000184263 402 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28604-201ENSMUST00000186629 484 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28566-201ENSMUST00000186714 484 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm29356-201ENSMUST00000186935 373 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28194-201ENSMUST00000187412 484 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28886-202ENSMUST00000187889 484 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28554-202ENSMUST00000189175 484 ntBASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc28bQ8CEG5 Gm29213-202ENSMUST00000189703 484 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms