Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Gm22899-201ENSMUST00000104540 131 ntBASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Gm15206-201ENSMUST00000119143 454 ntBASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Gm13932-201ENSMUST00000120873 610 ntBASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Gm17091-201ENSMUST00000163248 357 ntBASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Gm5558-201ENSMUST00000178933 495 ntBASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Gm37682-201ENSMUST00000191776 522 ntBASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Gm36998-201ENSMUST00000193205 704 ntBASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 AC120011.1-201ENSMUST00000202147 744 ntBASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Gm44054-201ENSMUST00000203814 372 ntBASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 AC159252.1-201ENSMUST00000224450 553 ntBASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Gm6065-201ENSMUST00000081336 492 ntBASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Gm6043-201ENSMUST00000099961 492 ntBASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Gm9314-201ENSMUST00000199881 1528 ntBASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.62□□□□□ -1.51
Atg4aQ8C9S8 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Gm7350-201ENSMUST00000120964 636 ntBASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Gm15304-201ENSMUST00000122150 2640 ntBASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Gm23082-201ENSMUST00000157852 133 ntBASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Gm37857-201ENSMUST00000191784 1199 ntBASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Gm37397-201ENSMUST00000194579 2842 ntBASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Gm44474-201ENSMUST00000196525 127 ntBASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Gm42502-201ENSMUST00000198550 1089 ntBASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Gm19596-201ENSMUST00000203685 739 ntBASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Gm44624-201ENSMUST00000208700 2278 ntBASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 AC106830.1-201ENSMUST00000228032 1003 ntBASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Atg4aQ8C9S8 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm43216-201ENSMUST00000196295 1333 ntBASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm22498-201ENSMUST00000104497 86 ntBASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm12062-201ENSMUST00000117533 259 ntBASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm15766-201ENSMUST00000118025 813 ntBASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm5258-201ENSMUST00000165437 327 ntBASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm21241-201ENSMUST00000179551 934 ntBASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm28011-201ENSMUST00000184097 175 ntBASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm29086-201ENSMUST00000186774 222 ntBASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm29085-201ENSMUST00000187108 225 ntBASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Atg4aQ8C9S8 Gm20819-201ENSMUST00000191091 925 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms