Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trub1Q8C0D0 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.72□□□□□ -1.65
Trub1Q8C0D0 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Gm22498-201ENSMUST00000104497 86 ntBASIC4.72□□□□□ -1.65
Trub1Q8C0D0 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Gm15166-201ENSMUST00000120790 385 ntBASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Gm12444-201ENSMUST00000121512 877 ntBASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Gm3362-201ENSMUST00000148102 466 ntBASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Gm24636-201ENSMUST00000158673 288 ntBASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Gm16566-201ENSMUST00000160387 910 ntBASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Gm9443-201ENSMUST00000188406 816 ntBASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Gm8264-201ENSMUST00000217801 465 ntBASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Gm8158-201ENSMUST00000219220 465 ntBASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Gm8112-201ENSMUST00000219637 465 ntBASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Gm23302-201ENSMUST00000082710 100 ntBASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trub1Q8C0D0 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trub1Q8C0D0 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Trub1Q8C0D0 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Trub1Q8C0D0 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.71□□□□□ -1.65
Trub1Q8C0D0 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Gm15905-201ENSMUST00000137042 298 ntBASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Gm16114-201ENSMUST00000161930 300 ntBASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Gm21999-201ENSMUST00000165985 387 ntBASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Gm28976-201ENSMUST00000188070 144 ntBASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Gm21617-201ENSMUST00000188297 691 ntBASIC4.71□□□□□ -1.66
Trub1Q8C0D0 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC4.71□□□□□ -1.66
Trub1Q8C0D0 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Gm45007-201ENSMUST00000206237 366 ntBASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Gm44603-201ENSMUST00000206820 367 ntBASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Gm44879-201ENSMUST00000207007 503 ntBASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Gm18306-201ENSMUST00000207338 569 ntBASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Gm45359-201ENSMUST00000210635 427 ntBASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Gm45910-201ENSMUST00000212493 1003 ntBASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trub1Q8C0D0 AC131745.1-201ENSMUST00000223660 330 ntBASIC4.71□□□□□ -1.66
Trub1Q8C0D0 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC4.71□□□□□ -1.66
Trub1Q8C0D0 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.71□□□□□ -1.66
Trub1Q8C0D0 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trub1Q8C0D0 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Gm24117-201ENSMUST00000103973 133 ntBASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Gm8051-201ENSMUST00000120464 466 ntBASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Gm14303-201ENSMUST00000121320 171 ntBASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Gm5353-201ENSMUST00000139800 793 ntBASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Scarna6-201ENSMUST00000158656 265 ntBASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Gm6214-201ENSMUST00000178845 541 ntBASIC4.7□□□□□ -1.66
Trub1Q8C0D0 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Gm9687-201ENSMUST00000189312 602 ntBASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Gm18382-201ENSMUST00000194394 582 ntBASIC4.7□□□□□ -1.66
Trub1Q8C0D0 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Gm42643-201ENSMUST00000200504 279 ntBASIC4.7□□□□□ -1.66
Trub1Q8C0D0 Gm6719-201ENSMUST00000202067 335 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms