Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Gm24235-201ENSMUST00000104319 129 ntBASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Gm15125-201ENSMUST00000116185 800 ntBASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Gm13213-201ENSMUST00000119668 474 ntBASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Gm5383-201ENSMUST00000121177 617 ntBASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Gm12413-201ENSMUST00000121508 312 ntBASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Gm15038-201ENSMUST00000122144 296 ntBASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Gm25807-201ENSMUST00000122783 305 ntBASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Gm22870-201ENSMUST00000157501 112 ntBASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Gm26487-201ENSMUST00000158022 94 ntBASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Gm25655-201ENSMUST00000158465 290 ntBASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Gm17038-201ENSMUST00000166586 494 ntBASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Gm43524-201ENSMUST00000197278 298 ntBASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Gm43035-201ENSMUST00000197626 517 ntBASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Gm3148-201ENSMUST00000203594 612 ntBASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Gm45344-201ENSMUST00000211610 341 ntBASIC7.19□□□□□ -1.26
Usp40Q8BWR4 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC7.19□□□□□ -1.26
Usp40Q8BWR4 AC166358.6-201ENSMUST00000221834 1206 ntBASIC7.19□□□□□ -1.26
Usp40Q8BWR4 AC163295.1-201ENSMUST00000227840 314 ntBASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Mir20a-201ENSMUST00000083508 107 ntBASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Gm8979-201ENSMUST00000183386 7296 ntBASIC7.19□□□□□ -1.26
Usp40Q8BWR4 AC124569.3-201ENSMUST00000224860 1621 ntBASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Usp40Q8BWR4 Gm9077-201ENSMUST00000210657 2298 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm12633-201ENSMUST00000117742 1705 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Usp40Q8BWR4 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Usp40Q8BWR4 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Mir193b-201ENSMUST00000103784 79 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm13195-201ENSMUST00000117229 261 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm16128-201ENSMUST00000117855 626 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm15388-201ENSMUST00000121578 726 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 n-R5s98-201ENSMUST00000122549 119 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm24960-201ENSMUST00000157923 90 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm17149-201ENSMUST00000164712 375 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm21758-201ENSMUST00000179336 819 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm28637-201ENSMUST00000179424 345 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm29413-201ENSMUST00000186019 880 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm28597-201ENSMUST00000187664 666 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm29639-201ENSMUST00000188375 580 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm29647-201ENSMUST00000188795 666 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm28337-201ENSMUST00000190425 666 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm18181-201ENSMUST00000190670 736 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm28504-201ENSMUST00000190977 666 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm31511-201ENSMUST00000193134 657 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm35843-201ENSMUST00000193716 666 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm37719-201ENSMUST00000194615 292 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm19921-201ENSMUST00000210505 703 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm18585-201ENSMUST00000215197 556 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 CT030684.2-201ENSMUST00000228946 826 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm23626-201ENSMUST00000082458 133 ntBASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Usp40Q8BWR4 Gm29084-201ENSMUST00000185587 1452 ntBASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp40Q8BWR4 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms