Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm23177-201ENSMUST00000116784 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm24193-201ENSMUST00000116801 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm24744-201ENSMUST00000116833 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm24427-201ENSMUST00000116896 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm22346-201ENSMUST00000116918 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm23606-201ENSMUST00000116938 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm22029-201ENSMUST00000116940 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm26298-201ENSMUST00000116956 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm23844-201ENSMUST00000116959 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm24484-201ENSMUST00000117009 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm25347-201ENSMUST00000117026 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm22112-201ENSMUST00000117032 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm13887-201ENSMUST00000119009 344 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm13902-201ENSMUST00000120168 605 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm13488-201ENSMUST00000120419 179 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm14925-201ENSMUST00000120611 438 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm12650-201ENSMUST00000121966 258 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm22519-201ENSMUST00000158270 178 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm22261-201ENSMUST00000158691 324 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm22991-201ENSMUST00000178126 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm25754-201ENSMUST00000178653 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm22419-201ENSMUST00000178780 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm24802-201ENSMUST00000178897 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm25208-201ENSMUST00000178964 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm24567-201ENSMUST00000179294 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm23943-201ENSMUST00000179712 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm25228-201ENSMUST00000180121 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm23304-201ENSMUST00000180209 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm44776-201ENSMUST00000207212 381 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 AC156559.1-201ENSMUST00000224158 222 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 AC154583.1-201ENSMUST00000224788 655 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Ankrd28-204ENSMUST00000227089 3522 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm43594-201ENSMUST00000201153 3442 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 AC135119.1-201ENSMUST00000227935 3717 ntBASIC5.15□□□□□ -1.58
Ccdc40Q8BI79 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.58
Ccdc40Q8BI79 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Ccdc40Q8BI79 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Ccdc40Q8BI79 Gm8475-201ENSMUST00000118211 526 ntBASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 Gm12039-201ENSMUST00000118219 180 ntBASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 Gm11507-201ENSMUST00000156462 412 ntBASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 Gm10319-202ENSMUST00000159439 846 ntBASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 Gm26731-201ENSMUST00000180683 543 ntBASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 Gm27528-201ENSMUST00000183544 205 ntBASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 Gm28060-201ENSMUST00000191554 189 ntBASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 Trbv27-201ENSMUST00000193711 277 ntBASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 Gm43304-201ENSMUST00000196803 326 ntBASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 Gm7721-201ENSMUST00000200446 546 ntBASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 Gm43036-201ENSMUST00000200594 373 ntBASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 AC153840.1-201ENSMUST00000219685 313 ntBASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 AL671874.1-201ENSMUST00000223746 1123 ntBASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 Gm24706-201ENSMUST00000082806 137 ntBASIC5.15□□□□□ -1.59
Ccdc40Q8BI79 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms