Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Gm9057-201ENSMUST00000198791 296 ntBASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Gm4602-201ENSMUST00000203198 308 ntBASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Gm8999-201ENSMUST00000204951 969 ntBASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Gm44776-201ENSMUST00000207212 381 ntBASIC5.63□□□□□ -1.51
Usp49Q6P9L4 AC153529.1-201ENSMUST00000217818 370 ntBASIC5.63□□□□□ -1.51
Usp49Q6P9L4 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC5.63□□□□□ -1.51
Usp49Q6P9L4 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Zfp429-203ENSMUST00000224684 524 ntBASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Mir27a-201ENSMUST00000083510 87 ntBASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Mir30b-201ENSMUST00000083542 96 ntBASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Usp49Q6P9L4 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Gm43781-201ENSMUST00000197634 2681 ntBASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Gm8202-201ENSMUST00000117682 310 ntBASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Gm12638-201ENSMUST00000119531 298 ntBASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Gm16463-201ENSMUST00000120527 721 ntBASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Gm16060-201ENSMUST00000153140 478 ntBASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Mir7056-201ENSMUST00000183776 59 ntBASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Gm29516-201ENSMUST00000190402 468 ntBASIC5.62□□□□□ -1.51
Usp49Q6P9L4 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Gm19057-201ENSMUST00000194329 1197 ntBASIC5.62□□□□□ -1.51
Usp49Q6P9L4 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp49Q6P9L4 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Gm6230-201ENSMUST00000208077 780 ntBASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Gm17766-201ENSMUST00000209223 442 ntBASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Gm45660-201ENSMUST00000210267 151 ntBASIC5.62□□□□□ -1.51
Usp49Q6P9L4 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.62□□□□□ -1.51
Usp49Q6P9L4 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.62□□□□□ -1.51
Usp49Q6P9L4 AC118230.1-201ENSMUST00000220196 656 ntBASIC5.62□□□□□ -1.51
Usp49Q6P9L4 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.62□□□□□ -1.51
Usp49Q6P9L4 AC132833.3-201ENSMUST00000227472 866 ntBASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Gm23407-201ENSMUST00000082538 91 ntBASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Gm42736-201ENSMUST00000200723 1353 ntBASIC5.62□□□□□ -1.51
Usp49Q6P9L4 AC122408.2-201ENSMUST00000217901 1391 ntBASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Gm5583-201ENSMUST00000174328 1519 ntBASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Usp49Q6P9L4 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Gm12245-201ENSMUST00000117266 357 ntBASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Gm14621-201ENSMUST00000117709 689 ntBASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Gm12717-201ENSMUST00000118427 983 ntBASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Gm15981-201ENSMUST00000119196 457 ntBASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Gm12704-201ENSMUST00000119789 464 ntBASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Gm25534-201ENSMUST00000175365 125 ntBASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Gm20574-201ENSMUST00000182867 917 ntBASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Gm38334-201ENSMUST00000195060 313 ntBASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Gm2622-201ENSMUST00000200018 471 ntBASIC5.61□□□□□ -1.51
Usp49Q6P9L4 Gm31520-201ENSMUST00000203048 733 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 119 ms