Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim41Q5NCC3 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim41Q5NCC3 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Gm38263-201ENSMUST00000195879 3059 ntBASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Gm14173-201ENSMUST00000117690 278 ntBASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Gm15333-201ENSMUST00000118825 364 ntBASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Gm14679-201ENSMUST00000121536 722 ntBASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Gm7931-201ENSMUST00000121537 271 ntBASIC11.05□□□□□ -0.64
Trim41Q5NCC3 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Gm16101-201ENSMUST00000160695 430 ntBASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Gm25243-201ENSMUST00000174912 207 ntBASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Gm20701-201ENSMUST00000176082 347 ntBASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Mir7056-201ENSMUST00000183776 59 ntBASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Gm19206-201ENSMUST00000186401 827 ntBASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Gm20172-201ENSMUST00000193138 1551 ntBASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Ighv1-45-201ENSMUST00000193677 352 ntBASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Ighv5-3-201ENSMUST00000195336 322 ntBASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Gm43712-201ENSMUST00000198020 291 ntBASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Gm44161-201ENSMUST00000203532 253 ntBASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Trim41Q5NCC3 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim41Q5NCC3 AC124709.3-201ENSMUST00000227294 171 ntBASIC11.05□□□□□ -0.64
Trim41Q5NCC3 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim41Q5NCC3 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Gm42507-201ENSMUST00000201187 2555 ntBASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trim41Q5NCC3 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Gm16089-201ENSMUST00000117679 336 ntBASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Gm5073-201ENSMUST00000118222 820 ntBASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Gm14162-201ENSMUST00000121985 601 ntBASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Gm11545-201ENSMUST00000146507 375 ntBASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC11.04□□□□□ -0.64
Trim41Q5NCC3 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Mir6541-201ENSMUST00000183649 110 ntBASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Gm27760-201ENSMUST00000185048 114 ntBASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Gm28299-201ENSMUST00000189908 339 ntBASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim41Q5NCC3 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Gm4032-201ENSMUST00000210886 487 ntBASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Gm46369-201ENSMUST00000221577 401 ntBASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Gm9292-201ENSMUST00000222008 710 ntBASIC11.04□□□□□ -0.64
Trim41Q5NCC3 AC166105.1-201ENSMUST00000227512 482 ntBASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Gm5341-201ENSMUST00000058881 489 ntBASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim41Q5NCC3 AL450321.1-201ENSMUST00000220600 3550 ntBASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim41Q5NCC3 AC125328.1-201ENSMUST00000226812 2265 ntBASIC11.04□□□□□ -0.64
Trim41Q5NCC3 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim41Q5NCC3 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Gm12303-201ENSMUST00000119506 673 ntBASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Gm12739-201ENSMUST00000119769 382 ntBASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Gm14175-201ENSMUST00000119835 241 ntBASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Gm4852-201ENSMUST00000121202 729 ntBASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Gm7670-201ENSMUST00000121272 641 ntBASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Gm26556-201ENSMUST00000180645 320 ntBASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Gm18667-201ENSMUST00000186523 484 ntBASIC11.03□□□□□ -0.64
Trim41Q5NCC3 Gm45473-201ENSMUST00000211452 616 ntBASIC11.03□□□□□ -0.64
Trim41Q5NCC3 AC160016.1-201ENSMUST00000215589 448 ntBASIC11.03□□□□□ -0.64
Trim41Q5NCC3 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC11.03□□□□□ -0.64
Trim41Q5NCC3 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms