Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm15796-201ENSMUST00000162135 204 ntBASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 Gm27160-201ENSMUST00000184837 199 ntBASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 Gm42428-201ENSMUST00000198677 302 ntBASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 Gm44820-201ENSMUST00000207420 396 ntBASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 AC132112.1-201ENSMUST00000226354 505 ntBASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 n-R5s85-201ENSMUST00000083453 113 ntBASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC5.06□□□□□ -1.6
Upf3aQ3ULJ3 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Gm7269-201ENSMUST00000210819 1373 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Igkv11-106-201ENSMUST00000103331 346 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Gm11914-201ENSMUST00000117094 507 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Defa-ps15-201ENSMUST00000118178 477 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Gm11212-201ENSMUST00000118337 618 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Gm13503-201ENSMUST00000119017 446 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Gm9208-201ENSMUST00000120468 948 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Gm24751-201ENSMUST00000157844 102 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Mir6960-201ENSMUST00000183449 61 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Gm5252-201ENSMUST00000189030 909 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 AC156832.3-201ENSMUST00000215591 435 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 CT025552.2-201ENSMUST00000225497 317 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Apoo-ps-201ENSMUST00000061241 586 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Mir346-201ENSMUST00000083547 98 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Olfr1143-201ENSMUST00000090708 945 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Gm15189-201ENSMUST00000121164 1966 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Gm42905-201ENSMUST00000196237 1611 ntBASIC5.05□□□□□ -1.6
Upf3aQ3ULJ3 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Gm22473-201ENSMUST00000104114 132 ntBASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Gm14854-201ENSMUST00000117758 841 ntBASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Gm14933-201ENSMUST00000118840 481 ntBASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Gm13815-201ENSMUST00000119963 412 ntBASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Gm26490-201ENSMUST00000157879 140 ntBASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Gm3084-201ENSMUST00000169967 598 ntBASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Gm27834-201ENSMUST00000183427 125 ntBASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Mir7222-201ENSMUST00000183740 75 ntBASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Mir3473f-201ENSMUST00000183743 136 ntBASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 Gm17951-201ENSMUST00000198536 496 ntBASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC5.04□□□□□ -1.6
Upf3aQ3ULJ3 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 114.1 ms