Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Gm28877-201ENSMUST00000191349 604 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Igkv12-47-201ENSMUST00000196961 356 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Gm43315-201ENSMUST00000198120 313 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Gm19104-201ENSMUST00000198392 679 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Gm2522-201ENSMUST00000204280 322 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 AC158536.1-201ENSMUST00000222510 256 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 AC131745.1-201ENSMUST00000223660 330 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Prl7a1-203ENSMUST00000224852 1283 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 n-R5s27-201ENSMUST00000093699 119 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.72□□□□□ -1.65
Trafd1Q3UDK1 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
Trafd1Q3UDK1 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Trafd1Q3UDK1 AC123705.3-201ENSMUST00000223531 2069 ntBASIC4.71□□□□□ -1.65
Trafd1Q3UDK1 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
Trafd1Q3UDK1 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Gm23948-201ENSMUST00000104030 132 ntBASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Gm23879-201ENSMUST00000116874 126 ntBASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Gm23534-201ENSMUST00000157539 97 ntBASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Gm22361-201ENSMUST00000158435 176 ntBASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Gm22116-201ENSMUST00000158791 141 ntBASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Mir6963-201ENSMUST00000183535 71 ntBASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Gm43919-201ENSMUST00000204303 364 ntBASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Gm17811-201ENSMUST00000206193 387 ntBASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Gm44879-201ENSMUST00000207007 503 ntBASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 CT030124.1-201ENSMUST00000217130 235 ntBASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 AC110816.1-201ENSMUST00000218559 980 ntBASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Gm23300-201ENSMUST00000082712 125 ntBASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Gm23796-201ENSMUST00000084011 160 ntBASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 BC055308-201ENSMUST00000193380 2538 ntBASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.71□□□□□ -1.66
Trafd1Q3UDK1 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Gm14706-201ENSMUST00000117744 255 ntBASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Gm15493-201ENSMUST00000119461 528 ntBASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Gm5353-201ENSMUST00000139800 793 ntBASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Gm26153-201ENSMUST00000157433 127 ntBASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Gm8214-201ENSMUST00000172123 351 ntBASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Gm21959-201ENSMUST00000178439 452 ntBASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 S100a11-ps-201ENSMUST00000181735 306 ntBASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 Gm5511-201ENSMUST00000189380 802 ntBASIC4.7□□□□□ -1.66
Trafd1Q3UDK1 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 120.1 ms