Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col8a1Q00780 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col8a1Q00780 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a1Q00780 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col8a1Q00780 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col8a1Q00780 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm25512-201ENSMUST00000083863 107 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col8a1Q00780 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Col8a1Q00780 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.18□□□□□ -1.58
Col8a1Q00780 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a1Q00780 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a1Q00780 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col8a1Q00780 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a1Q00780 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col8a1Q00780 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a1Q00780 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a1Q00780 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a1Q00780 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a1Q00780 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a1Q00780 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col8a1Q00780 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a1Q00780 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a1Q00780 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a1Q00780 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col8a1Q00780 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col8a1Q00780 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col8a1Q00780 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a1Q00780 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC5.17□□□□□ -1.58
Col8a1Q00780 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a1Q00780 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a1Q00780 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Col8a1Q00780 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC5.17□□□□□ -1.58
Col8a1Q00780 AC156636.2-201ENSMUST00000218845 4557 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a1Q00780 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a1Q00780 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Col8a1Q00780 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col8a1Q00780 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col8a1Q00780 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm6744-201ENSMUST00000119303 543 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm15266-201ENSMUST00000119635 255 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm13738-201ENSMUST00000122437 469 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm24295-201ENSMUST00000158298 131 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm25898-201ENSMUST00000158303 106 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm26173-201ENSMUST00000158416 136 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm23024-201ENSMUST00000158770 292 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.17□□□□□ -1.58
Col8a1Q00780 Mir6337-201ENSMUST00000184194 105 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm28385-201ENSMUST00000185671 292 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm18340-201ENSMUST00000196342 609 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm8039-201ENSMUST00000204758 712 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a1Q00780 AC153840.1-201ENSMUST00000219685 313 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 AC159263.3-201ENSMUST00000223434 460 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
Col8a1Q00780 AC131747.1-201ENSMUST00000226159 793 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a1Q00780 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm23345-201ENSMUST00000083817 150 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col8a1Q00780 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC5.17□□□□□ -1.58
Col8a1Q00780 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a1Q00780 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a1Q00780 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a1Q00780 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm44416-201ENSMUST00000204055 2066 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm45786-201ENSMUST00000213021 2278 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col8a1Q00780 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col8a1Q00780 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Col8a1Q00780 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm37569-201ENSMUST00000192111 1722 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm38699-201ENSMUST00000221301 1740 ntBASIC5.17□□□□□ -1.58
Col8a1Q00780 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col8a1Q00780 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC5.17□□□□□ -1.58
Col8a1Q00780 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col8a1Q00780 AC122305.1-201ENSMUST00000214803 3921 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col8a1Q00780 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
Col8a1Q00780 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC5.16□□□□□ -1.58
Col8a1Q00780 Gm42645-201ENSMUST00000201573 1627 ntBASIC5.16□□□□□ -1.58
Col8a1Q00780 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC5.16□□□□□ -1.58
Col8a1Q00780 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms