Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
H3f3aP84244 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.21□□□□□ -1.74
H3f3aP84244 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
H3f3aP84244 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
H3f3aP84244 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC4.21□□□□□ -1.74
H3f3aP84244 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC4.21□□□□□ -1.74
H3f3aP84244 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
H3f3aP84244 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.2□□□□□ -1.74
H3f3aP84244 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.2□□□□□ -1.74
H3f3aP84244 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
H3f3aP84244 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
H3f3aP84244 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
H3f3aP84244 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
H3f3aP84244 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
H3f3aP84244 Gm23746-201ENSMUST00000104229 125 ntBASIC4.2□□□□□ -1.74
H3f3aP84244 Gm22020-201ENSMUST00000104358 136 ntBASIC4.2□□□□□ -1.74
H3f3aP84244 Gm22899-201ENSMUST00000104540 131 ntBASIC4.2□□□□□ -1.74
H3f3aP84244 Gm23879-201ENSMUST00000116874 126 ntBASIC4.2□□□□□ -1.74
H3f3aP84244 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
H3f3aP84244 Gm13430-201ENSMUST00000121366 288 ntBASIC4.2□□□□□ -1.74
H3f3aP84244 Gm13149-201ENSMUST00000122071 339 ntBASIC4.2□□□□□ -1.74
H3f3aP84244 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.2□□□□□ -1.74
H3f3aP84244 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC4.2□□□□□ -1.74
H3f3aP84244 Gm22819-201ENSMUST00000157445 303 ntBASIC4.2□□□□□ -1.74
H3f3aP84244 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
H3f3aP84244 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
H3f3aP84244 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC4.2□□□□□ -1.74
H3f3aP84244 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC4.2□□□□□ -1.74
H3f3aP84244 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
H3f3aP84244 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
H3f3aP84244 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
H3f3aP84244 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
H3f3aP84244 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
H3f3aP84244 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
H3f3aP84244 Gm26950-201ENSMUST00000182734 498 ntBASIC4.2□□□□□ -1.74
H3f3aP84244 Gm29484-201ENSMUST00000186067 324 ntBASIC4.2□□□□□ -1.74
H3f3aP84244 Gm29036-201ENSMUST00000189967 877 ntBASIC4.2□□□□□ -1.74
H3f3aP84244 Gm44485-201ENSMUST00000199569 137 ntBASIC4.2□□□□□ -1.74
H3f3aP84244 Gm43276-201ENSMUST00000199712 364 ntBASIC4.2□□□□□ -1.74
H3f3aP84244 Gm2522-201ENSMUST00000204280 322 ntBASIC4.2□□□□□ -1.74
H3f3aP84244 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.2□□□□□ -1.74
H3f3aP84244 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.2□□□□□ -1.74
H3f3aP84244 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
H3f3aP84244 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
H3f3aP84244 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
H3f3aP84244 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC4.2□□□□□ -1.74
H3f3aP84244 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
H3f3aP84244 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
H3f3aP84244 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
H3f3aP84244 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
H3f3aP84244 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.2□□□□□ -1.74
H3f3aP84244 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
H3f3aP84244 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
H3f3aP84244 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
H3f3aP84244 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
H3f3aP84244 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
H3f3aP84244 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
H3f3aP84244 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
H3f3aP84244 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
H3f3aP84244 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
H3f3aP84244 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
H3f3aP84244 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.19□□□□□ -1.74
H3f3aP84244 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
H3f3aP84244 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.19□□□□□ -1.74
H3f3aP84244 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
H3f3aP84244 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.19□□□□□ -1.74
H3f3aP84244 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
H3f3aP84244 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC4.19□□□□□ -1.74
H3f3aP84244 Gm24124-201ENSMUST00000104103 132 ntBASIC4.19□□□□□ -1.74
H3f3aP84244 Gm23594-201ENSMUST00000104307 134 ntBASIC4.19□□□□□ -1.74
H3f3aP84244 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
H3f3aP84244 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC4.19□□□□□ -1.74
H3f3aP84244 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
H3f3aP84244 Gm24675-201ENSMUST00000158757 259 ntBASIC4.19□□□□□ -1.74
H3f3aP84244 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
H3f3aP84244 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
H3f3aP84244 Mir7006-201ENSMUST00000183624 69 ntBASIC4.19□□□□□ -1.74
H3f3aP84244 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.19□□□□□ -1.74
H3f3aP84244 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
H3f3aP84244 Gm43631-201ENSMUST00000202011 369 ntBASIC4.19□□□□□ -1.74
H3f3aP84244 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC4.19□□□□□ -1.74
H3f3aP84244 Gm44603-201ENSMUST00000206820 367 ntBASIC4.19□□□□□ -1.74
H3f3aP84244 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.19□□□□□ -1.74
H3f3aP84244 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.19□□□□□ -1.74
H3f3aP84244 AC098742.1-201ENSMUST00000227945 373 ntBASIC4.19□□□□□ -1.74
H3f3aP84244 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
H3f3aP84244 Gm24031-201ENSMUST00000083930 131 ntBASIC4.19□□□□□ -1.74
H3f3aP84244 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
H3f3aP84244 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
H3f3aP84244 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.19□□□□□ -1.74
H3f3aP84244 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
H3f3aP84244 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
H3f3aP84244 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
H3f3aP84244 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
H3f3aP84244 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
H3f3aP84244 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
H3f3aP84244 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
H3f3aP84244 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
H3f3aP84244 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
H3f3aP84244 Gm19176-201ENSMUST00000222149 1831 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms