Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb1P63158 Gm43392-201ENSMUST00000196560 434 ntBASIC6.14□□□□□ -1.43
Hmgb1P63158 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC6.14□□□□□ -1.43
Hmgb1P63158 AC133650.1-201ENSMUST00000217243 578 ntBASIC6.14□□□□□ -1.43
Hmgb1P63158 Gm8137-201ENSMUST00000218997 463 ntBASIC6.14□□□□□ -1.43
Hmgb1P63158 Gm31931-201ENSMUST00000219666 222 ntBASIC6.14□□□□□ -1.43
Hmgb1P63158 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb1P63158 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
Hmgb1P63158 AC164315.1-201ENSMUST00000226452 708 ntBASIC6.14□□□□□ -1.43
Hmgb1P63158 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb1P63158 Gm10108-201ENSMUST00000078246 319 ntBASIC6.14□□□□□ -1.43
Hmgb1P63158 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Hmgb1P63158 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Hmgb1P63158 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Hmgb1P63158 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb1P63158 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb1P63158 Gm38278-201ENSMUST00000194715 1365 ntBASIC6.14□□□□□ -1.43
Hmgb1P63158 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb1P63158 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC6.14□□□□□ -1.43
Hmgb1P63158 Gm37862-201ENSMUST00000193079 2533 ntBASIC6.14□□□□□ -1.43
Hmgb1P63158 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Hmgb1P63158 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb1P63158 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb1P63158 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm37101-201ENSMUST00000191656 3660 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm2348-201ENSMUST00000108782 300 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm11774-201ENSMUST00000118601 293 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm11484-201ENSMUST00000119808 338 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm13489-201ENSMUST00000121234 971 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm23430-201ENSMUST00000122490 314 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm22599-201ENSMUST00000157597 132 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm18397-201ENSMUST00000176704 587 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm25412-201ENSMUST00000180258 107 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Mir6361-201ENSMUST00000185079 101 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm27148-201ENSMUST00000185086 160 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb1P63158 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm5731-201ENSMUST00000190969 481 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm7496-201ENSMUST00000192573 1034 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm412-201ENSMUST00000193360 948 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm43828-201ENSMUST00000196890 639 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm44349-201ENSMUST00000197048 123 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm31861-201ENSMUST00000204563 672 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm44002-201ENSMUST00000205134 594 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm44768-201ENSMUST00000205719 393 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm4032-201ENSMUST00000210886 487 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Hmgb1P63158 AC158641.1-201ENSMUST00000218933 229 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 AC164426.1-201ENSMUST00000225745 929 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 CT010453.2-201ENSMUST00000227005 483 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm23104-201ENSMUST00000083722 104 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm42537-201ENSMUST00000198260 2574 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb1P63158 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC6.13□□□□□ -1.43
Hmgb1P63158 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb1P63158 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb1P63158 Gm42616-201ENSMUST00000198989 4184 ntBASIC6.13□□□□□ -1.43
Hmgb1P63158 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Hmgb1P63158 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Hmgb1P63158 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Hmgb1P63158 Gm43197-201ENSMUST00000201493 2583 ntBASIC6.12□□□□□ -1.43
Hmgb1P63158 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb1P63158 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb1P63158 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Hmgb1P63158 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb1P63158 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Hmgb1P63158 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb1P63158 Gm13676-201ENSMUST00000122185 591 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms