Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm43675-201ENSMUST00000199468 1184 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 Gm45063-201ENSMUST00000203726 472 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Rfx1P48377 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC7.01□□□□□ -1.29
Rfx1P48377 Gm45700-201ENSMUST00000205866 347 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 Gm7495-201ENSMUST00000215099 426 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 AC153924.1-201ENSMUST00000220117 312 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 Gm18405-201ENSMUST00000220743 511 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 Gm7240-201ENSMUST00000220769 664 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC7.01□□□□□ -1.29
Rfx1P48377 AC156569.1-201ENSMUST00000222020 3841 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 CT025598.1-201ENSMUST00000225140 427 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Rfx1P48377 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Rfx1P48377 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Rfx1P48377 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rfx1P48377 Gm26108-201ENSMUST00000083973 191 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 Gm5518-201ENSMUST00000084171 648 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Rfx1P48377 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Rfx1P48377 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Rfx1P48377 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC7.01□□□□□ -1.29
Rfx1P48377 AC124569.3-201ENSMUST00000224860 1621 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Rfx1P48377 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Rfx1P48377 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Rfx1P48377 Gm43443-201ENSMUST00000202337 2393 ntBASIC7.01□□□□□ -1.29
Rfx1P48377 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Rfx1P48377 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Rfx1P48377 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Rfx1P48377 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Rfx1P48377 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Rfx1P48377 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC7□□□□□ -1.29
Rfx1P48377 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Rfx1P48377 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC7□□□□□ -1.29
Rfx1P48377 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Rfx1P48377 AC156031.1-201ENSMUST00000217288 2555 ntBASIC7□□□□□ -1.29
Rfx1P48377 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Rfx1P48377 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC7□□□□□ -1.29
Rfx1P48377 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Rfx1P48377 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC7□□□□□ -1.29
Rfx1P48377 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC7□□□□□ -1.29
Rfx1P48377 Gm14750-201ENSMUST00000118262 516 ntBASIC7□□□□□ -1.29
Rfx1P48377 Gm15181-201ENSMUST00000120142 177 ntBASIC7□□□□□ -1.29
Rfx1P48377 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC7□□□□□ -1.29
Rfx1P48377 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC7□□□□□ -1.29
Rfx1P48377 Gm16274-201ENSMUST00000139251 592 ntBASIC7□□□□□ -1.29
Rfx1P48377 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Rfx1P48377 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC7□□□□□ -1.29
Rfx1P48377 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Rfx1P48377 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC7□□□□□ -1.29
Rfx1P48377 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC7□□□□□ -1.29
Rfx1P48377 Gm17981-201ENSMUST00000191109 739 ntBASIC7□□□□□ -1.29
Rfx1P48377 Ass-ps1-201ENSMUST00000197717 761 ntBASIC7□□□□□ -1.29
Rfx1P48377 Gm42776-201ENSMUST00000198031 406 ntBASIC7□□□□□ -1.29
Rfx1P48377 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC7□□□□□ -1.29
Rfx1P48377 Gm44910-201ENSMUST00000208451 396 ntBASIC7□□□□□ -1.29
Rfx1P48377 Gm19936-201ENSMUST00000216414 838 ntBASIC7□□□□□ -1.29
Rfx1P48377 Gm7034-201ENSMUST00000218638 645 ntBASIC7□□□□□ -1.29
Rfx1P48377 Gm30155-201ENSMUST00000223458 339 ntBASIC7□□□□□ -1.29
Rfx1P48377 AC117202.3-201ENSMUST00000228532 310 ntBASIC7□□□□□ -1.29
Rfx1P48377 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC7□□□□□ -1.29
Rfx1P48377 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Rfx1P48377 n-R5s41-201ENSMUST00000083025 119 ntBASIC7□□□□□ -1.29
Rfx1P48377 n-R5s58-201ENSMUST00000093682 119 ntBASIC7□□□□□ -1.29
Rfx1P48377 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Rfx1P48377 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC7□□□□□ -1.29
Rfx1P48377 Gm44708-201ENSMUST00000205580 2237 ntBASIC7□□□□□ -1.29
Rfx1P48377 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Rfx1P48377 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Rfx1P48377 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Rfx1P48377 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC7□□□□□ -1.29
Rfx1P48377 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Rfx1P48377 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC6.99□□□□□ -1.29
Rfx1P48377 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Rfx1P48377 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Rfx1P48377 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Rfx1P48377 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Rfx1P48377 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Rfx1P48377 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Rfx1P48377 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Rfx1P48377 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
Rfx1P48377 Gm23294-201ENSMUST00000104150 164 ntBASIC6.99□□□□□ -1.29
Rfx1P48377 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Rfx1P48377 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Rfx1P48377 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC6.99□□□□□ -1.29
Rfx1P48377 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.99□□□□□ -1.29
Rfx1P48377 Gm6744-201ENSMUST00000119303 543 ntBASIC6.99□□□□□ -1.29
Rfx1P48377 Gm13493-201ENSMUST00000120318 493 ntBASIC6.99□□□□□ -1.29
Rfx1P48377 Gm5405-201ENSMUST00000120478 609 ntBASIC6.99□□□□□ -1.29
Rfx1P48377 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC6.99□□□□□ -1.29
Rfx1P48377 Gm8722-201ENSMUST00000121466 769 ntBASIC6.99□□□□□ -1.29
Rfx1P48377 Gm12451-201ENSMUST00000121636 633 ntBASIC6.99□□□□□ -1.29
Rfx1P48377 Gm7973-201ENSMUST00000122107 488 ntBASIC6.99□□□□□ -1.29
Rfx1P48377 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Rfx1P48377 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.99□□□□□ -1.29
Rfx1P48377 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Rfx1P48377 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.99□□□□□ -1.29
Rfx1P48377 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC6.99□□□□□ -1.29
Rfx1P48377 Gm25874-201ENSMUST00000178030 79 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms