Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 CT025710.1-201ENSMUST00000222949 2533 ntBASIC4.54□□□□□ -1.68
Cdx2P43241 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cdx2P43241 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Cdx2P43241 Gm29112-201ENSMUST00000188962 3487 ntBASIC4.54□□□□□ -1.68
Cdx2P43241 Gm43696-201ENSMUST00000199385 6071 ntBASIC4.54□□□□□ -1.68
Cdx2P43241 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cdx2P43241 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Cdx2P43241 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.54□□□□□ -1.68
Cdx2P43241 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC4.54□□□□□ -1.68
Cdx2P43241 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Cdx2P43241 Gm16394-201ENSMUST00000117289 675 ntBASIC4.54□□□□□ -1.68
Cdx2P43241 Gm12131-201ENSMUST00000117479 359 ntBASIC4.54□□□□□ -1.68
Cdx2P43241 Klra14-ps-201ENSMUST00000119532 802 ntBASIC4.54□□□□□ -1.68
Cdx2P43241 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cdx2P43241 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC4.54□□□□□ -1.68
Cdx2P43241 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC4.54□□□□□ -1.68
Cdx2P43241 Mir1903-201ENSMUST00000122574 80 ntBASIC4.54□□□□□ -1.68
Cdx2P43241 Gm24477-201ENSMUST00000157438 103 ntBASIC4.54□□□□□ -1.68
Cdx2P43241 Gm22819-201ENSMUST00000157445 303 ntBASIC4.54□□□□□ -1.68
Cdx2P43241 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cdx2P43241 Gm10087-201ENSMUST00000167650 330 ntBASIC4.54□□□□□ -1.68
Cdx2P43241 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cdx2P43241 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC4.54□□□□□ -1.68
Cdx2P43241 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC4.54□□□□□ -1.68
Cdx2P43241 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC4.54□□□□□ -1.68
Cdx2P43241 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cdx2P43241 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC4.54□□□□□ -1.68
Cdx2P43241 Gm43604-201ENSMUST00000199799 705 ntBASIC4.54□□□□□ -1.68
Cdx2P43241 Gm45722-201ENSMUST00000213075 466 ntBASIC4.54□□□□□ -1.68
Cdx2P43241 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.54□□□□□ -1.68
Cdx2P43241 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cdx2P43241 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cdx2P43241 Gm23928-201ENSMUST00000082469 145 ntBASIC4.54□□□□□ -1.68
Cdx2P43241 Gm25140-201ENSMUST00000083254 140 ntBASIC4.54□□□□□ -1.68
Cdx2P43241 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cdx2P43241 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.54□□□□□ -1.68
Cdx2P43241 Gm15189-201ENSMUST00000121164 1966 ntBASIC4.54□□□□□ -1.68
Cdx2P43241 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.54□□□□□ -1.68
Cdx2P43241 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Cdx2P43241 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cdx2P43241 Gm37780-201ENSMUST00000194117 1873 ntBASIC4.54□□□□□ -1.68
Cdx2P43241 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Cdx2P43241 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Cdx2P43241 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx2P43241 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx2P43241 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx2P43241 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx2P43241 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Cdx2P43241 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx2P43241 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx2P43241 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx2P43241 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC4.53□□□□□ -1.68
Cdx2P43241 Gm29488-201ENSMUST00000191427 2402 ntBASIC4.53□□□□□ -1.68
Cdx2P43241 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx2P43241 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Cdx2P43241 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Cdx2P43241 Gm15603-201ENSMUST00000119252 492 ntBASIC4.53□□□□□ -1.68
Cdx2P43241 Llph-ps1-201ENSMUST00000121281 390 ntBASIC4.53□□□□□ -1.68
Cdx2P43241 Gm13024-201ENSMUST00000121756 718 ntBASIC4.53□□□□□ -1.68
Cdx2P43241 Llph-ps2-201ENSMUST00000122000 393 ntBASIC4.53□□□□□ -1.68
Cdx2P43241 Gm22613-201ENSMUST00000122679 292 ntBASIC4.53□□□□□ -1.68
Cdx2P43241 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC4.53□□□□□ -1.68
Cdx2P43241 Gm22211-201ENSMUST00000158097 156 ntBASIC4.53□□□□□ -1.68
Cdx2P43241 Gm24905-201ENSMUST00000158129 104 ntBASIC4.53□□□□□ -1.68
Cdx2P43241 Gm3091-201ENSMUST00000163408 484 ntBASIC4.53□□□□□ -1.68
Cdx2P43241 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
Cdx2P43241 Gm9294-201ENSMUST00000165198 789 ntBASIC4.53□□□□□ -1.68
Cdx2P43241 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.53□□□□□ -1.68
Cdx2P43241 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx2P43241 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.53□□□□□ -1.68
Cdx2P43241 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx2P43241 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC4.53□□□□□ -1.68
Cdx2P43241 Gm44474-201ENSMUST00000196525 127 ntBASIC4.53□□□□□ -1.68
Cdx2P43241 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC4.53□□□□□ -1.68
Cdx2P43241 Gm43580-201ENSMUST00000202892 284 ntBASIC4.53□□□□□ -1.68
Cdx2P43241 Gm44234-201ENSMUST00000204246 900 ntBASIC4.53□□□□□ -1.68
Cdx2P43241 Gm44650-201ENSMUST00000206929 194 ntBASIC4.53□□□□□ -1.68
Cdx2P43241 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Cdx2P43241 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.53□□□□□ -1.68
Cdx2P43241 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.53□□□□□ -1.68
Cdx2P43241 AC165092.2-201ENSMUST00000224681 368 ntBASIC4.53□□□□□ -1.68
Cdx2P43241 AL589696.1-201ENSMUST00000225711 330 ntBASIC4.53□□□□□ -1.68
Cdx2P43241 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Cdx2P43241 Gm23300-201ENSMUST00000082712 125 ntBASIC4.53□□□□□ -1.68
Cdx2P43241 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx2P43241 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.53□□□□□ -1.68
Cdx2P43241 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Cdx2P43241 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Cdx2P43241 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Cdx2P43241 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Cdx2P43241 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.69
Cdx2P43241 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
Cdx2P43241 Gm42535-201ENSMUST00000197312 1399 ntBASIC4.53□□□□□ -1.69
Cdx2P43241 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.52□□□□□ -1.69
Cdx2P43241 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx2P43241 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx2P43241 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.52□□□□□ -1.69
Cdx2P43241 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Cdx2P43241 Gm38105-201ENSMUST00000192112 2621 ntBASIC4.52□□□□□ -1.69
Cdx2P43241 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms