Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.5□□□□□ -1.69
Sox6P40645 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.5□□□□□ -1.69
Sox6P40645 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC4.5□□□□□ -1.69
Sox6P40645 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.5□□□□□ -1.69
Sox6P40645 Gm16318-201ENSMUST00000162402 601 ntBASIC4.5□□□□□ -1.69
Sox6P40645 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sox6P40645 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.5□□□□□ -1.69
Sox6P40645 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Sox6P40645 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC4.5□□□□□ -1.69
Sox6P40645 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC4.5□□□□□ -1.69
Sox6P40645 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sox6P40645 Gm9442-201ENSMUST00000194242 319 ntBASIC4.5□□□□□ -1.69
Sox6P40645 Gm19617-201ENSMUST00000202977 308 ntBASIC4.5□□□□□ -1.69
Sox6P40645 Gm18325-201ENSMUST00000203228 835 ntBASIC4.5□□□□□ -1.69
Sox6P40645 Gm9038-201ENSMUST00000203400 604 ntBASIC4.5□□□□□ -1.69
Sox6P40645 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC4.5□□□□□ -1.69
Sox6P40645 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Sox6P40645 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.5□□□□□ -1.69
Sox6P40645 AC142113.2-201ENSMUST00000217425 748 ntBASIC4.5□□□□□ -1.69
Sox6P40645 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Sox6P40645 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
Sox6P40645 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Sox6P40645 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Sox6P40645 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sox6P40645 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Sox6P40645 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.5□□□□□ -1.69
Sox6P40645 Mir365-2-201ENSMUST00000083555 112 ntBASIC4.5□□□□□ -1.69
Sox6P40645 Olfr654-201ENSMUST00000098173 1155 ntBASIC4.5□□□□□ -1.69
Sox6P40645 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Sox6P40645 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sox6P40645 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sox6P40645 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sox6P40645 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sox6P40645 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.49□□□□□ -1.69
Sox6P40645 Gm7709-201ENSMUST00000199391 1858 ntBASIC4.49□□□□□ -1.69
Sox6P40645 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.49□□□□□ -1.69
Sox6P40645 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
Sox6P40645 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.49□□□□□ -1.69
Sox6P40645 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.49□□□□□ -1.69
Sox6P40645 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sox6P40645 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sox6P40645 Gm15357-201ENSMUST00000119160 285 ntBASIC4.49□□□□□ -1.69
Sox6P40645 Gm14861-201ENSMUST00000119451 455 ntBASIC4.49□□□□□ -1.69
Sox6P40645 Gm11790-201ENSMUST00000119569 455 ntBASIC4.49□□□□□ -1.69
Sox6P40645 Gm15390-201ENSMUST00000120323 738 ntBASIC4.49□□□□□ -1.69
Sox6P40645 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.49□□□□□ -1.69
Sox6P40645 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sox6P40645 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sox6P40645 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sox6P40645 Gm17421-201ENSMUST00000167845 674 ntBASIC4.49□□□□□ -1.69
Sox6P40645 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sox6P40645 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sox6P40645 Gm28389-201ENSMUST00000190090 697 ntBASIC4.49□□□□□ -1.69
Sox6P40645 Gm28957-201ENSMUST00000190174 373 ntBASIC4.49□□□□□ -1.69
Sox6P40645 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sox6P40645 Gm36983-201ENSMUST00000192280 1102 ntBASIC4.49□□□□□ -1.69
Sox6P40645 Gm45200-201ENSMUST00000207434 919 ntBASIC4.49□□□□□ -1.69
Sox6P40645 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.49□□□□□ -1.69
Sox6P40645 Gm6049-201ENSMUST00000222369 458 ntBASIC4.49□□□□□ -1.69
Sox6P40645 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.49□□□□□ -1.69
Sox6P40645 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.49□□□□□ -1.69
Sox6P40645 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sox6P40645 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Sox6P40645 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sox6P40645 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
Sox6P40645 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Sox6P40645 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Sox6P40645 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sox6P40645 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sox6P40645 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Sox6P40645 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.49□□□□□ -1.69
Sox6P40645 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sox6P40645 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sox6P40645 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.49□□□□□ -1.69
Sox6P40645 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Sox6P40645 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Sox6P40645 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
Sox6P40645 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sox6P40645 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sox6P40645 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sox6P40645 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.48□□□□□ -1.69
Sox6P40645 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Sox6P40645 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.48□□□□□ -1.69
Sox6P40645 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sox6P40645 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sox6P40645 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Sox6P40645 Gm12760-201ENSMUST00000117861 482 ntBASIC4.48□□□□□ -1.69
Sox6P40645 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC4.48□□□□□ -1.69
Sox6P40645 Gm14125-202ENSMUST00000120921 756 ntBASIC4.48□□□□□ -1.69
Sox6P40645 Defa-ps14-201ENSMUST00000121373 418 ntBASIC4.48□□□□□ -1.69
Sox6P40645 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.48□□□□□ -1.69
Sox6P40645 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Sox6P40645 Gm17060-201ENSMUST00000172394 824 ntBASIC4.48□□□□□ -1.69
Sox6P40645 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Sox6P40645 Gm8321-201ENSMUST00000181691 980 ntBASIC4.48□□□□□ -1.69
Sox6P40645 Gm26983-201ENSMUST00000182051 388 ntBASIC4.48□□□□□ -1.69
Sox6P40645 Gm27036-201ENSMUST00000182465 980 ntBASIC4.48□□□□□ -1.69
Sox6P40645 Gm27492-201ENSMUST00000185194 187 ntBASIC4.48□□□□□ -1.69
Sox6P40645 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Sox6P40645 Gm29552-201ENSMUST00000190548 660 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms