Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm19201-201ENSMUST00000210127 778 ntBASIC4.29□□□□□ -1.72
P20040 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.29□□□□□ -1.72
P20040 Gm18924-201ENSMUST00000211929 316 ntBASIC4.29□□□□□ -1.72
P20040 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC4.29□□□□□ -1.72
P20040 AC137127.3-201ENSMUST00000213340 349 ntBASIC4.29□□□□□ -1.72
P20040 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.29□□□□□ -1.72
P20040 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
P20040 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.29□□□□□ -1.72
P20040 AC121912.1-201ENSMUST00000227525 1201 ntBASIC4.29□□□□□ -1.72
P20040 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
P20040 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
P20040 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
P20040 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC4.29□□□□□ -1.72
P20040 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
P20040 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.29□□□□□ -1.72
P20040 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
P20040 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
P20040 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
P20040 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
P20040 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
P20040 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
P20040 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
P20040 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
P20040 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
P20040 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
P20040 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.29□□□□□ -1.72
P20040 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
P20040 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
P20040 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
P20040 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
P20040 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
P20040 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
P20040 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
P20040 Gm22194-201ENSMUST00000116869 95 ntBASIC4.28□□□□□ -1.72
P20040 Gm15670-201ENSMUST00000117740 447 ntBASIC4.28□□□□□ -1.72
P20040 Gm11409-201ENSMUST00000118621 403 ntBASIC4.28□□□□□ -1.72
P20040 Gm12685-201ENSMUST00000121702 214 ntBASIC4.28□□□□□ -1.72
P20040 Gm13232-201ENSMUST00000121816 632 ntBASIC4.28□□□□□ -1.72
P20040 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC4.28□□□□□ -1.72
P20040 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
P20040 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
P20040 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
P20040 Gm3091-201ENSMUST00000163408 484 ntBASIC4.28□□□□□ -1.72
P20040 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC4.28□□□□□ -1.72
P20040 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC4.28□□□□□ -1.72
P20040 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC4.28□□□□□ -1.72
P20040 Gm44523-201ENSMUST00000205616 417 ntBASIC4.28□□□□□ -1.72
P20040 Gm45171-201ENSMUST00000206360 736 ntBASIC4.28□□□□□ -1.72
P20040 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.28□□□□□ -1.72
P20040 Gm18127-201ENSMUST00000208479 725 ntBASIC4.28□□□□□ -1.72
P20040 Gm18850-201ENSMUST00000211578 388 ntBASIC4.28□□□□□ -1.72
P20040 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.28□□□□□ -1.72
P20040 AC153961.2-201ENSMUST00000218877 164 ntBASIC4.28□□□□□ -1.72
P20040 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC4.28□□□□□ -1.72
P20040 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.28□□□□□ -1.72
P20040 AC133517.2-201ENSMUST00000226820 690 ntBASIC4.28□□□□□ -1.72
P20040 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
P20040 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
P20040 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
P20040 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
P20040 Gm36963-201ENSMUST00000193506 2324 ntBASIC4.28□□□□□ -1.72
P20040 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
P20040 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
P20040 AC102847.2-201ENSMUST00000227799 2906 ntBASIC4.28□□□□□ -1.72
P20040 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
P20040 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.28□□□□□ -1.73
P20040 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
P20040 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
P20040 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
P20040 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
P20040 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
P20040 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.27□□□□□ -1.73
P20040 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.27□□□□□ -1.73
P20040 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.27□□□□□ -1.73
P20040 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.27□□□□□ -1.73
P20040 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
P20040 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
P20040 Gm37174-201ENSMUST00000194699 3058 ntBASIC4.27□□□□□ -1.73
P20040 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
P20040 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.27□□□□□ -1.73
P20040 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
P20040 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
P20040 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
P20040 Gm15828-201ENSMUST00000119911 522 ntBASIC4.27□□□□□ -1.73
P20040 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.27□□□□□ -1.73
P20040 Gm14229-201ENSMUST00000121178 850 ntBASIC4.27□□□□□ -1.73
P20040 Defa-ps14-201ENSMUST00000121373 418 ntBASIC4.27□□□□□ -1.73
P20040 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.27□□□□□ -1.73
P20040 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.27□□□□□ -1.73
P20040 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC4.27□□□□□ -1.73
P20040 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
P20040 Gm23534-201ENSMUST00000157539 97 ntBASIC4.27□□□□□ -1.73
P20040 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
P20040 Gm22355-201ENSMUST00000175531 96 ntBASIC4.27□□□□□ -1.73
P20040 Gm27492-201ENSMUST00000185194 187 ntBASIC4.27□□□□□ -1.73
P20040 Gm2497-201ENSMUST00000189539 601 ntBASIC4.27□□□□□ -1.73
P20040 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
P20040 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
P20040 Gm37908-201ENSMUST00000195828 470 ntBASIC4.27□□□□□ -1.73
P20040 Gm43768-201ENSMUST00000198380 1258 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms