Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm17528-201ENSMUST00000171026 239 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Snora15-201ENSMUST00000177461 131 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm4956-202ENSMUST00000178869 672 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC5.42□□□□□ -1.54
Hoxd3P09027 AC099934.1-201ENSMUST00000200493 79 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm8479-201ENSMUST00000203825 718 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm21054-201ENSMUST00000203981 380 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm8132-201ENSMUST00000204938 640 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm9357-201ENSMUST00000207138 805 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd3P09027 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd3P09027 AL669916.5-201ENSMUST00000214874 361 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC5.42□□□□□ -1.54
Hoxd3P09027 AC155270.1-202ENSMUST00000221503 352 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm46997-201ENSMUST00000222108 217 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 AC125311.1-201ENSMUST00000226950 220 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Glycam1-204ENSMUST00000228895 641 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd3P09027 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Hoxd3P09027 n-R5s41-201ENSMUST00000083025 119 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.42□□□□□ -1.54
Hoxd3P09027 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm43019-201ENSMUST00000196948 2863 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm44584-201ENSMUST00000208395 2880 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd3P09027 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Hoxd3P09027 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC5.42□□□□□ -1.54
Hoxd3P09027 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd3P09027 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Hoxd3P09027 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
Hoxd3P09027 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd3P09027 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Hoxd3P09027 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC5.42□□□□□ -1.54
Hoxd3P09027 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm9030-201ENSMUST00000218405 2410 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm9029-201ENSMUST00000219232 2410 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm43189-201ENSMUST00000196040 3069 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxd3P09027 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxd3P09027 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm10568-201ENSMUST00000193244 1634 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxd3P09027 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxd3P09027 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxd3P09027 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxd3P09027 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm7821-201ENSMUST00000117111 788 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm6181-201ENSMUST00000117187 264 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm14163-201ENSMUST00000117342 217 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm12686-201ENSMUST00000120546 397 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm12804-201ENSMUST00000121030 999 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm6541-201ENSMUST00000165542 561 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm4373-201ENSMUST00000178571 556 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm27018-201ENSMUST00000181136 225 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm27645-201ENSMUST00000183348 77 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm27360-201ENSMUST00000183487 80 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 Mir6382-201ENSMUST00000184055 110 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 Mir7033-201ENSMUST00000184259 81 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm28117-201ENSMUST00000188472 371 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 Ighv1-29-201ENSMUST00000194116 342 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxd3P09027 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm18488-201ENSMUST00000215082 364 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.41□□□□□ -1.54
Hoxd3P09027 Gm19238-201ENSMUST00000221936 1260 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 CT030184.2-201ENSMUST00000223064 263 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 AC133598.3-204ENSMUST00000224260 767 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 AC154224.1-201ENSMUST00000224367 403 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 AV026068-237ENSMUST00000226075 572 ntBASIC5.41□□□□□ -1.54
Hoxd3P09027 Mir19a-201ENSMUST00000083482 82 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms