Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cx3cl1O35188 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cx3cl1O35188 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cx3cl1O35188 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cx3cl1O35188 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Cx3cl1O35188 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Cx3cl1O35188 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm13033-201ENSMUST00000117591 1057 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm11366-201ENSMUST00000119279 429 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm14957-201ENSMUST00000121069 817 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm7840-201ENSMUST00000122086 533 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm3362-201ENSMUST00000148102 466 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm26098-201ENSMUST00000157247 288 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm25603-201ENSMUST00000158361 105 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm20674-201ENSMUST00000177452 369 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm8502-201ENSMUST00000185708 901 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm21147-201ENSMUST00000186046 913 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm9687-201ENSMUST00000189312 602 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm36998-201ENSMUST00000193205 704 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm43015-201ENSMUST00000199087 565 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm18330-201ENSMUST00000199246 547 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC4.44□□□□□ -1.7
Cx3cl1O35188 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm8264-201ENSMUST00000217801 465 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm8158-201ENSMUST00000219220 465 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm8112-201ENSMUST00000219637 465 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Cx3cl1O35188 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC4.44□□□□□ -1.7
Cx3cl1O35188 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Cx3cl1O35188 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
Cx3cl1O35188 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Cx3cl1O35188 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Cx3cl1O35188 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cx3cl1O35188 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cx3cl1O35188 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cx3cl1O35188 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.44□□□□□ -1.7
Cx3cl1O35188 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Cx3cl1O35188 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.44□□□□□ -1.7
Cx3cl1O35188 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Cx3cl1O35188 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cx3cl1O35188 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC4.43□□□□□ -1.7
Cx3cl1O35188 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cx3cl1O35188 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cx3cl1O35188 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cx3cl1O35188 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
Cx3cl1O35188 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Cx3cl1O35188 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.43□□□□□ -1.7
Cx3cl1O35188 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cx3cl1O35188 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cx3cl1O35188 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
Cx3cl1O35188 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.43□□□□□ -1.7
Cx3cl1O35188 Gm16128-201ENSMUST00000117855 626 ntBASIC4.43□□□□□ -1.7
Cx3cl1O35188 Gm12287-201ENSMUST00000119770 707 ntBASIC4.43□□□□□ -1.7
Cx3cl1O35188 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.43□□□□□ -1.7
Cx3cl1O35188 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cx3cl1O35188 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC4.43□□□□□ -1.7
Cx3cl1O35188 Gm9499-201ENSMUST00000180888 964 ntBASIC4.43□□□□□ -1.7
Cx3cl1O35188 Mir7056-201ENSMUST00000183776 59 ntBASIC4.43□□□□□ -1.7
Cx3cl1O35188 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cx3cl1O35188 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.43□□□□□ -1.7
Cx3cl1O35188 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC4.43□□□□□ -1.7
Cx3cl1O35188 Gm45171-201ENSMUST00000206360 736 ntBASIC4.43□□□□□ -1.7
Cx3cl1O35188 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC4.43□□□□□ -1.7
Cx3cl1O35188 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.43□□□□□ -1.7
Cx3cl1O35188 CT954323.2-201ENSMUST00000222056 213 ntBASIC4.43□□□□□ -1.7
Cx3cl1O35188 AL589696.1-201ENSMUST00000225711 330 ntBASIC4.43□□□□□ -1.7
Cx3cl1O35188 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.43□□□□□ -1.7
Cx3cl1O35188 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cx3cl1O35188 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cx3cl1O35188 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.43□□□□□ -1.7
Cx3cl1O35188 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cx3cl1O35188 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cx3cl1O35188 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.43□□□□□ -1.7
Cx3cl1O35188 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.43□□□□□ -1.7
Cx3cl1O35188 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.43□□□□□ -1.7
Cx3cl1O35188 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cx3cl1O35188 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cx3cl1O35188 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Cx3cl1O35188 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.42□□□□□ -1.7
Cx3cl1O35188 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Cx3cl1O35188 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cx3cl1O35188 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Cx3cl1O35188 Gm22899-201ENSMUST00000104540 131 ntBASIC4.42□□□□□ -1.7
Cx3cl1O35188 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC4.42□□□□□ -1.7
Cx3cl1O35188 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 98.4 ms