Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.54□□□□□ -1.68
Use1Q9CQ56 AC114572.1-201ENSMUST00000227262 300 ntBASIC4.54□□□□□ -1.68
Use1Q9CQ56 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Use1Q9CQ56 n-R5s36-201ENSMUST00000082998 119 ntBASIC4.54□□□□□ -1.68
Use1Q9CQ56 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Use1Q9CQ56 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm44439-201ENSMUST00000203379 3592 ntBASIC4.53□□□□□ -1.68
Use1Q9CQ56 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm10997-201ENSMUST00000210294 1500 ntBASIC4.53□□□□□ -1.68
Use1Q9CQ56 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.53□□□□□ -1.68
Use1Q9CQ56 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Mir676-201ENSMUST00000102443 89 ntBASIC4.53□□□□□ -1.68
Use1Q9CQ56 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm11481-201ENSMUST00000120069 255 ntBASIC4.53□□□□□ -1.68
Use1Q9CQ56 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm25106-201ENSMUST00000122672 134 ntBASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm25293-201ENSMUST00000122792 285 ntBASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm17081-201ENSMUST00000167363 478 ntBASIC4.53□□□□□ -1.68
Use1Q9CQ56 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm29556-201ENSMUST00000187591 696 ntBASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm8939-201ENSMUST00000192577 964 ntBASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm10292-202ENSMUST00000193165 585 ntBASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm19231-201ENSMUST00000193212 830 ntBASIC4.53□□□□□ -1.68
Use1Q9CQ56 Igkv3-8-201ENSMUST00000197635 339 ntBASIC4.53□□□□□ -1.68
Use1Q9CQ56 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Use1Q9CQ56 AC158536.1-201ENSMUST00000222510 256 ntBASIC4.53□□□□□ -1.68
Use1Q9CQ56 AC159263.3-201ENSMUST00000223434 460 ntBASIC4.53□□□□□ -1.68
Use1Q9CQ56 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Use1Q9CQ56 AC174797.3-203ENSMUST00000225749 2078 ntBASIC4.53□□□□□ -1.68
Use1Q9CQ56 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Use1Q9CQ56 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.53□□□□□ -1.68
Use1Q9CQ56 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.53□□□□□ -1.68
Use1Q9CQ56 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.69
Use1Q9CQ56 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Use1Q9CQ56 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm28322-201ENSMUST00000185627 1475 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm14909-201ENSMUST00000117853 351 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm16106-201ENSMUST00000119187 294 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 H3f3c-201ENSMUST00000119459 411 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm14516-201ENSMUST00000120012 252 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm14125-202ENSMUST00000120921 756 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Use1Q9CQ56 Gm25389-201ENSMUST00000157340 286 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms