Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Gm29401-201ENSMUST00000186690 615 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Gm29178-204ENSMUST00000186784 615 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Gm28589-201ENSMUST00000186991 615 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Gm28936-201ENSMUST00000187153 615 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Gm29121-201ENSMUST00000187611 615 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Gm28243-201ENSMUST00000187801 615 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Gm28844-202ENSMUST00000187977 615 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Gm29058-201ENSMUST00000189510 615 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Gm29624-201ENSMUST00000190018 615 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Gm28780-201ENSMUST00000190223 615 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Gm28969-211ENSMUST00000190992 615 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Gm28990-207ENSMUST00000191219 615 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Gm36468-201ENSMUST00000192119 615 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Gm8939-201ENSMUST00000192577 964 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Gm31572-201ENSMUST00000193341 615 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Gm30175-201ENSMUST00000194173 615 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Gm30858-201ENSMUST00000195516 615 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Gm36985-201ENSMUST00000195595 379 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Gm7721-201ENSMUST00000200446 546 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 AC167013.2-202ENSMUST00000227035 333 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 CT025548.1-201ENSMUST00000227459 257 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 AC121912.1-201ENSMUST00000227525 1201 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Olfr1160-201ENSMUST00000099839 960 ntBASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
Cdk5rap3Q99LM2 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
Cdk5rap3Q99LM2 Neat1-201ENSMUST00000173672 20771 ntBASIC5.09□□□□□ -1.6
Cdk5rap3Q99LM2 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Cdk5rap3Q99LM2 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Cdk5rap3Q99LM2 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.09□□□□□ -1.6
Cdk5rap3Q99LM2 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.09□□□□□ -1.6
Cdk5rap3Q99LM2 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Gm10997-201ENSMUST00000210294 1500 ntBASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Gm42968-201ENSMUST00000198578 1372 ntBASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Gm8595-201ENSMUST00000118250 630 ntBASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Gm14991-201ENSMUST00000119913 598 ntBASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Gm13508-201ENSMUST00000121639 775 ntBASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Gm12752-201ENSMUST00000121657 811 ntBASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Gm24690-201ENSMUST00000157759 97 ntBASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Gm24931-201ENSMUST00000158324 107 ntBASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Gm24860-201ENSMUST00000158457 276 ntBASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Gm37632-201ENSMUST00000191811 1142 ntBASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Gm43554-201ENSMUST00000199987 186 ntBASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Gm45474-201ENSMUST00000209471 408 ntBASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Gm8748-201ENSMUST00000211125 587 ntBASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Olfr151-202ENSMUST00000221099 929 ntBASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 CT025598.1-201ENSMUST00000225140 427 ntBASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Gm5045-201ENSMUST00000027054 810 ntBASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Gm25682-201ENSMUST00000083942 164 ntBASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Gm9386-201ENSMUST00000095195 381 ntBASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdk5rap3Q99LM2 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cdk5rap3Q99LM2 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Cdk5rap3Q99LM2 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.07□□□□□ -1.6
Cdk5rap3Q99LM2 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cdk5rap3Q99LM2 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Cdk5rap3Q99LM2 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms