Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.66□□□□□ -1.5
Pcdha9Q91Y11 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Pcdha9Q91Y11 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.66□□□□□ -1.5
Pcdha9Q91Y11 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdha9Q91Y11 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC5.66□□□□□ -1.5
Pcdha9Q91Y11 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Pcdha9Q91Y11 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdha9Q91Y11 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Pcdha9Q91Y11 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Pcdha9Q91Y11 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Gm24350-201ENSMUST00000104163 133 ntBASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Gm15021-201ENSMUST00000117832 742 ntBASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Gm12901-201ENSMUST00000118690 532 ntBASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Gm14991-201ENSMUST00000119913 598 ntBASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Gm7670-201ENSMUST00000121272 641 ntBASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Gm8614-201ENSMUST00000182528 978 ntBASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Gm27636-201ENSMUST00000184528 122 ntBASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Gm9317-201ENSMUST00000197055 862 ntBASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Gm33952-201ENSMUST00000197795 408 ntBASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Gm33178-201ENSMUST00000212090 257 ntBASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Gm46136-201ENSMUST00000214730 565 ntBASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Pcdha9Q91Y11 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Pcdha9Q91Y11 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.65□□□□□ -1.51
Pcdha9Q91Y11 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Pcdha9Q91Y11 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Pcdha9Q91Y11 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Pcdha9Q91Y11 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.65□□□□□ -1.51
Pcdha9Q91Y11 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.65□□□□□ -1.51
Pcdha9Q91Y11 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.65□□□□□ -1.51
Pcdha9Q91Y11 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
Pcdha9Q91Y11 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Pcdha9Q91Y11 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.65□□□□□ -1.51
Pcdha9Q91Y11 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Smc5-206ENSMUST00000226111 3265 ntBASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Gm24230-201ENSMUST00000104313 129 ntBASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Gm15110-201ENSMUST00000117545 881 ntBASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Gm8595-201ENSMUST00000118250 630 ntBASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Gm11407-201ENSMUST00000120362 1058 ntBASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Gm11358-201ENSMUST00000122310 373 ntBASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Gm25433-201ENSMUST00000158283 286 ntBASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Gm10087-201ENSMUST00000167650 330 ntBASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Mir6911-201ENSMUST00000184241 69 ntBASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Gm27266-201ENSMUST00000184521 123 ntBASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Gm28429-201ENSMUST00000188521 363 ntBASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Gm38281-201ENSMUST00000192301 315 ntBASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Gm37882-201ENSMUST00000195254 196 ntBASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Gm18340-201ENSMUST00000196342 609 ntBASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Gm44181-201ENSMUST00000203106 483 ntBASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Gm8719-201ENSMUST00000203602 534 ntBASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Gm45379-201ENSMUST00000211772 549 ntBASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Gm18409-202ENSMUST00000220105 529 ntBASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 AC174776.1-201ENSMUST00000221509 405 ntBASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 AC174776.2-201ENSMUST00000222561 405 ntBASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.64□□□□□ -1.51
Pcdha9Q91Y11 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 122.9 ms