Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm24687-201ENSMUST00000157758 241 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm26173-201ENSMUST00000158416 136 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm3242-201ENSMUST00000171273 485 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm23631-201ENSMUST00000175291 123 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm21809-201ENSMUST00000178495 468 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm17412-201ENSMUST00000179261 468 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm27976-201ENSMUST00000183635 162 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC5.39□□□□□ -1.55
Clrn1Q8K445 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Trbv22-201ENSMUST00000191697 291 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm37491-201ENSMUST00000192552 1111 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm36985-201ENSMUST00000195595 379 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Ighv1-68-201ENSMUST00000198789 294 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm43033-201ENSMUST00000199682 425 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm44360-201ENSMUST00000200081 82 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm45226-201ENSMUST00000206602 288 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm44961-201ENSMUST00000207450 196 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm9685-201ENSMUST00000211275 538 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm45874-201ENSMUST00000212423 346 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Clrn1Q8K445 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Clrn1Q8K445 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.39□□□□□ -1.55
Clrn1Q8K445 AC154417.1-201ENSMUST00000223876 476 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 CT030662.2-201ENSMUST00000226942 805 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm6104-201ENSMUST00000078030 603 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm23623-201ENSMUST00000082461 107 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.39□□□□□ -1.55
Clrn1Q8K445 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.39□□□□□ -1.55
Clrn1Q8K445 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.38□□□□□ -1.55
Clrn1Q8K445 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.38□□□□□ -1.55
Clrn1Q8K445 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm8475-201ENSMUST00000118211 526 ntBASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm15400-201ENSMUST00000118944 601 ntBASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm14106-201ENSMUST00000119382 438 ntBASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm12358-201ENSMUST00000121842 520 ntBASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm22158-201ENSMUST00000158411 126 ntBASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm24734-201ENSMUST00000158860 262 ntBASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm24875-201ENSMUST00000158888 104 ntBASIC5.38□□□□□ -1.55
Clrn1Q8K445 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm22857-201ENSMUST00000174969 134 ntBASIC5.38□□□□□ -1.55
Clrn1Q8K445 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm21754-201ENSMUST00000177550 479 ntBASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm27919-201ENSMUST00000185163 107 ntBASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm7654-201ENSMUST00000186738 683 ntBASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm29086-201ENSMUST00000186774 222 ntBASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm29085-201ENSMUST00000187108 225 ntBASIC5.38□□□□□ -1.55
Clrn1Q8K445 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm43315-201ENSMUST00000198120 313 ntBASIC5.38□□□□□ -1.55
Clrn1Q8K445 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm44990-201ENSMUST00000203922 217 ntBASIC5.38□□□□□ -1.55
Clrn1Q8K445 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm45596-201ENSMUST00000209279 434 ntBASIC5.38□□□□□ -1.55
Clrn1Q8K445 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm38574-201ENSMUST00000211855 640 ntBASIC5.38□□□□□ -1.55
Clrn1Q8K445 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC5.38□□□□□ -1.55
Clrn1Q8K445 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC5.38□□□□□ -1.55
Clrn1Q8K445 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Clrn1Q8K445 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 137.3 ms