Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Gm12186-201ENSMUST00000119050 945 ntBASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Gm13430-201ENSMUST00000121366 288 ntBASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Gm29484-201ENSMUST00000186067 324 ntBASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Gm29138-201ENSMUST00000191444 348 ntBASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Gm37961-201ENSMUST00000192729 299 ntBASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Gm43237-201ENSMUST00000196835 1044 ntBASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Gm43828-201ENSMUST00000196890 639 ntBASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Gm43309-201ENSMUST00000200837 458 ntBASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Gm43596-201ENSMUST00000202818 884 ntBASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Gm44138-201ENSMUST00000204939 271 ntBASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Gm7128-201ENSMUST00000211639 533 ntBASIC4.75□□□□□ -1.65
Trub1Q8C0D0 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Gm7333-201ENSMUST00000213449 1060 ntBASIC4.75□□□□□ -1.65
Trub1Q8C0D0 AC156832.3-201ENSMUST00000215591 435 ntBASIC4.75□□□□□ -1.65
Trub1Q8C0D0 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.75□□□□□ -1.65
Trub1Q8C0D0 AC211878.2-201ENSMUST00000222486 488 ntBASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Gm7676-201ENSMUST00000084055 319 ntBASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Gm44668-201ENSMUST00000207911 3265 ntBASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Gm37217-201ENSMUST00000194017 3521 ntBASIC4.75□□□□□ -1.65
Trub1Q8C0D0 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Trub1Q8C0D0 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Gm23594-201ENSMUST00000104307 134 ntBASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Gm14500-201ENSMUST00000121647 113 ntBASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Gm13232-201ENSMUST00000121816 632 ntBASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Gm13149-201ENSMUST00000122071 339 ntBASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Gm24251-201ENSMUST00000157324 114 ntBASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Gm24507-201ENSMUST00000157683 134 ntBASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Gm26034-201ENSMUST00000158154 116 ntBASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Mir7022-201ENSMUST00000183749 61 ntBASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Gm36991-201ENSMUST00000191800 648 ntBASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Gm44474-201ENSMUST00000196525 127 ntBASIC4.74□□□□□ -1.65
Trub1Q8C0D0 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Gm3338-201ENSMUST00000220982 269 ntBASIC4.74□□□□□ -1.65
Trub1Q8C0D0 AC134439.2-201ENSMUST00000221950 467 ntBASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.74□□□□□ -1.65
Trub1Q8C0D0 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Gm11909-201ENSMUST00000121424 759 ntBASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Gm5258-201ENSMUST00000165437 327 ntBASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Gm17086-201ENSMUST00000171346 484 ntBASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Gm27165-201ENSMUST00000183951 232 ntBASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Gm5066-201ENSMUST00000188479 822 ntBASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Gm38150-201ENSMUST00000192996 452 ntBASIC4.73□□□□□ -1.65
Trub1Q8C0D0 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.73□□□□□ -1.65
Trub1Q8C0D0 AC120011.1-201ENSMUST00000202147 744 ntBASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Gm44054-201ENSMUST00000203814 372 ntBASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Gm45857-201ENSMUST00000212207 356 ntBASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Gm18442-201ENSMUST00000220925 639 ntBASIC4.73□□□□□ -1.65
Trub1Q8C0D0 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms