Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Gm24230-201ENSMUST00000104313 129 ntBASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Gm4910-201ENSMUST00000119605 366 ntBASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Gm22725-201ENSMUST00000158092 110 ntBASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Gm26404-201ENSMUST00000158498 109 ntBASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Gm6673-201ENSMUST00000166114 700 ntBASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Gm4831-201ENSMUST00000174626 594 ntBASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Gm27976-201ENSMUST00000183635 162 ntBASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Gm28196-201ENSMUST00000187719 640 ntBASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Gm34176-201ENSMUST00000192621 474 ntBASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Gm42720-201ENSMUST00000196813 300 ntBASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Gm18215-201ENSMUST00000204429 798 ntBASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Gm44048-201ENSMUST00000204531 361 ntBASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Gm45269-201ENSMUST00000210359 282 ntBASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Olfr151-202ENSMUST00000221099 929 ntBASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 AC174797.2-203ENSMUST00000224017 716 ntBASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Gm23459-201ENSMUST00000083259 131 ntBASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ccdc40Q8BI79 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Gm36951-201ENSMUST00000193840 2687 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Gm23692-201ENSMUST00000101881 160 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Gm22273-201ENSMUST00000104040 132 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Gm11912-201ENSMUST00000117235 264 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Gm14046-201ENSMUST00000119389 509 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Gm15828-201ENSMUST00000119911 522 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Gm14516-201ENSMUST00000120012 252 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Gm2182-201ENSMUST00000145243 663 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Gm9027-201ENSMUST00000165914 661 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Gm2959-201ENSMUST00000169844 621 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Gm26983-201ENSMUST00000182051 388 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Mir7008-201ENSMUST00000184398 63 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Mir6400-201ENSMUST00000184870 92 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Gm29484-201ENSMUST00000186067 324 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Gm37070-201ENSMUST00000193272 460 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Gm2623-201ENSMUST00000199229 286 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Gm44038-201ENSMUST00000203952 889 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 CU024892.1-201ENSMUST00000224869 515 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 AC124408.1-201ENSMUST00000228938 707 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Gm23972-201ENSMUST00000083322 165 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Gm9386-201ENSMUST00000095195 381 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Gm43010-201ENSMUST00000195993 2878 ntBASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ccdc40Q8BI79 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm37718-201ENSMUST00000191655 2631 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm22468-201ENSMUST00000116680 120 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm26248-201ENSMUST00000116700 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm26137-201ENSMUST00000116701 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm26190-201ENSMUST00000116704 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm24617-201ENSMUST00000116705 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm25778-201ENSMUST00000116713 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm25774-201ENSMUST00000116717 121 ntBASIC5.16□□□□□ -1.58
Ccdc40Q8BI79 Gm22102-201ENSMUST00000116730 121 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms