Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm38263-201ENSMUST00000195879 3059 ntBASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm13787-201ENSMUST00000120422 168 ntBASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Mir338-201ENSMUST00000083666 98 ntBASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Ccdc88aQ5SNZ0 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm44485-201ENSMUST00000199569 137 ntBASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm17956-201ENSMUST00000199931 838 ntBASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm14303-201ENSMUST00000121320 171 ntBASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm18181-201ENSMUST00000190670 736 ntBASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm44463-201ENSMUST00000198895 137 ntBASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm44402-201ENSMUST00000203677 238 ntBASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 AC164116.1-201ENSMUST00000225810 622 ntBASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Ccdc88aQ5SNZ0 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm12112-201ENSMUST00000117772 231 ntBASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm15038-201ENSMUST00000122144 296 ntBASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm2182-201ENSMUST00000145243 663 ntBASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm37030-201ENSMUST00000194254 295 ntBASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm44871-201ENSMUST00000207821 497 ntBASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Gm5338-201ENSMUST00000209530 639 ntBASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 AC123534.1-201ENSMUST00000224060 656 ntBASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Ccdc88aQ5SNZ0 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms