Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm25977-201ENSMUST00000158697 85 ntBASIC3.13□□□□□ -1.91
PrkdcP97313 Gm16026-202ENSMUST00000159695 772 ntBASIC3.13□□□□□ -1.91
PrkdcP97313 Gm5244-202ENSMUST00000189517 743 ntBASIC3.13□□□□□ -1.91
PrkdcP97313 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC3.13□□□□□ -1.91
PrkdcP97313 Gm36943-201ENSMUST00000194422 282 ntBASIC3.13□□□□□ -1.91
PrkdcP97313 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.13□□□□□ -1.91
PrkdcP97313 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
PrkdcP97313 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC3.13□□□□□ -1.91
PrkdcP97313 AC151730.2-201ENSMUST00000224027 475 ntBASIC3.13□□□□□ -1.91
PrkdcP97313 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.13□□□□□ -1.91
PrkdcP97313 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PrkdcP97313 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PrkdcP97313 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PrkdcP97313 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PrkdcP97313 AC107645.1-201ENSMUST00000228660 1810 ntBASIC3.13□□□□□ -1.91
PrkdcP97313 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PrkdcP97313 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PrkdcP97313 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
PrkdcP97313 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PrkdcP97313 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PrkdcP97313 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.12□□□□□ -1.91
PrkdcP97313 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.12□□□□□ -1.91
PrkdcP97313 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 Gm29592-201ENSMUST00000189434 370 ntBASIC3.12□□□□□ -1.91
PrkdcP97313 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 AC123534.1-201ENSMUST00000224060 656 ntBASIC3.12□□□□□ -1.91
PrkdcP97313 AC130673.2-201ENSMUST00000228091 797 ntBASIC3.12□□□□□ -1.91
PrkdcP97313 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
PrkdcP97313 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
PrkdcP97313 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC3.12□□□□□ -1.91
PrkdcP97313 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC3.12□□□□□ -1.91
PrkdcP97313 AC124581.3-201ENSMUST00000224270 1624 ntBASIC3.12□□□□□ -1.91
PrkdcP97313 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
PrkdcP97313 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
PrkdcP97313 Gm15426-201ENSMUST00000117823 556 ntBASIC3.12□□□□□ -1.91
PrkdcP97313 Gm12095-201ENSMUST00000121962 816 ntBASIC3.12□□□□□ -1.91
PrkdcP97313 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 Gm24931-201ENSMUST00000158324 107 ntBASIC3.12□□□□□ -1.91
PrkdcP97313 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
PrkdcP97313 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 Gm43853-201ENSMUST00000197162 301 ntBASIC3.12□□□□□ -1.91
PrkdcP97313 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.12□□□□□ -1.91
PrkdcP97313 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.12□□□□□ -1.91
PrkdcP97313 Gm18116-201ENSMUST00000220920 537 ntBASIC3.12□□□□□ -1.91
PrkdcP97313 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
PrkdcP97313 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
PrkdcP97313 AC153940.1-201ENSMUST00000220149 5300 ntBASIC3.12□□□□□ -1.91
PrkdcP97313 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC3.12□□□□□ -1.91
PrkdcP97313 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
PrkdcP97313 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 Dlg2-201ENSMUST00000074273 5278 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
PrkdcP97313 Gm44739-201ENSMUST00000205294 1426 ntBASIC3.12□□□□□ -1.91
PrkdcP97313 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 Gm23755-201ENSMUST00000157578 343 ntBASIC3.12□□□□□ -1.91
PrkdcP97313 Gm37603-201ENSMUST00000192368 219 ntBASIC3.12□□□□□ -1.91
PrkdcP97313 Gm43941-201ENSMUST00000203303 1073 ntBASIC3.12□□□□□ -1.91
PrkdcP97313 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
PrkdcP97313 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 Gm42704-201ENSMUST00000196875 1778 ntBASIC3.12□□□□□ -1.91
PrkdcP97313 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 Tbx22-203ENSMUST00000168174 5217 ntAPPRIS P4 TSL 2 BASIC3.12□□□□□ -1.91
PrkdcP97313 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
PrkdcP97313 Gm15313-201ENSMUST00000119179 282 ntBASIC3.12□□□□□ -1.91
PrkdcP97313 Gm14383-201ENSMUST00000121637 386 ntBASIC3.12□□□□□ -1.91
PrkdcP97313 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC3.12□□□□□ -1.91
PrkdcP97313 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 Gm44843-201ENSMUST00000208320 1396 ntBASIC3.12□□□□□ -1.91
PrkdcP97313 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PrkdcP97313 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
PrkdcP97313 AC153964.1-201ENSMUST00000219677 3142 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Gm45211-201ENSMUST00000206208 2650 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PrkdcP97313 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
PrkdcP97313 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PrkdcP97313 Gm24281-201ENSMUST00000104234 136 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 Gm24788-201ENSMUST00000104283 156 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 Gm23667-201ENSMUST00000157466 120 ntBASIC3.11□□□□□ -1.91
PrkdcP97313 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms