Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Shmt1P50431 Gm43431-201ENSMUST00000198577 340 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Shmt1P50431 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.76□□□□□ -1.49
Shmt1P50431 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.76□□□□□ -1.49
Shmt1P50431 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Shmt1P50431 AC126275.1-201ENSMUST00000224881 446 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 AC154484.2-201ENSMUST00000228359 818 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Shmt1P50431 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Shmt1P50431 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Shmt1P50431 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Shmt1P50431 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Shmt1P50431 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Shmt1P50431 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Shmt1P50431 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.76□□□□□ -1.49
Shmt1P50431 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.76□□□□□ -1.49
Shmt1P50431 AC132336.1-201ENSMUST00000222844 1740 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Shmt1P50431 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.76□□□□□ -1.49
Shmt1P50431 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Shmt1P50431 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Shmt1P50431 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.76□□□□□ -1.49
Shmt1P50431 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Shmt1P50431 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Shmt1P50431 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Shmt1P50431 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Shmt1P50431 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Shmt1P50431 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.75□□□□□ -1.49
Shmt1P50431 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.75□□□□□ -1.49
Shmt1P50431 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Shmt1P50431 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.75□□□□□ -1.49
Shmt1P50431 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
Shmt1P50431 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Shmt1P50431 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.75□□□□□ -1.49
Shmt1P50431 Mir711-201ENSMUST00000102188 82 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC5.75□□□□□ -1.49
Shmt1P50431 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.75□□□□□ -1.49
Shmt1P50431 Gm6134-201ENSMUST00000117265 171 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Gm13080-201ENSMUST00000120556 420 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Llph-ps1-201ENSMUST00000121281 390 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Klra11-ps-201ENSMUST00000122033 810 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC5.75□□□□□ -1.49
Shmt1P50431 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 Gm22261-201ENSMUST00000158691 324 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Gm16589-201ENSMUST00000159522 918 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.75□□□□□ -1.49
Shmt1P50431 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Gm21241-201ENSMUST00000179551 934 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.75□□□□□ -1.49
Shmt1P50431 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.75□□□□□ -1.49
Shmt1P50431 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 Gm29263-201ENSMUST00000188718 463 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Shmt1P50431 Gm18775-201ENSMUST00000190763 586 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 Gm28211-201ENSMUST00000190920 315 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC5.75□□□□□ -1.49
Shmt1P50431 Gm42437-201ENSMUST00000197263 923 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Gm42502-201ENSMUST00000198550 1089 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Gm43979-201ENSMUST00000203179 475 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 Gm6230-201ENSMUST00000208077 780 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC5.75□□□□□ -1.49
Shmt1P50431 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC5.75□□□□□ -1.49
Shmt1P50431 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Shmt1P50431 Gnrh1-202ENSMUST00000223929 428 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 AV026068-231ENSMUST00000225862 482 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.75□□□□□ -1.49
Shmt1P50431 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Shmt1P50431 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms