Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.39□□□□□ -1.71
Tnfsf4P43488 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.39□□□□□ -1.71
Tnfsf4P43488 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
Tnfsf4P43488 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Tnfsf4P43488 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Tnfsf4P43488 Gm43528-201ENSMUST00000199492 1674 ntBASIC4.39□□□□□ -1.71
Tnfsf4P43488 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Tnfsf4P43488 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Tnfsf4P43488 Mir1188-201ENSMUST00000116756 120 ntBASIC4.39□□□□□ -1.71
Tnfsf4P43488 Gm13386-201ENSMUST00000117677 124 ntBASIC4.39□□□□□ -1.71
Tnfsf4P43488 Gm11255-201ENSMUST00000120448 1180 ntBASIC4.39□□□□□ -1.71
Tnfsf4P43488 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC4.39□□□□□ -1.71
Tnfsf4P43488 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Tnfsf4P43488 Gm23250-201ENSMUST00000157444 267 ntBASIC4.39□□□□□ -1.71
Tnfsf4P43488 Gm25342-201ENSMUST00000157459 122 ntBASIC4.39□□□□□ -1.71
Tnfsf4P43488 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC4.39□□□□□ -1.71
Tnfsf4P43488 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.39□□□□□ -1.71
Tnfsf4P43488 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Tnfsf4P43488 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.39□□□□□ -1.71
Tnfsf4P43488 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Tnfsf4P43488 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
Tnfsf4P43488 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC4.39□□□□□ -1.71
Tnfsf4P43488 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC4.39□□□□□ -1.71
Tnfsf4P43488 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC4.39□□□□□ -1.71
Tnfsf4P43488 Gm18036-201ENSMUST00000195256 272 ntBASIC4.39□□□□□ -1.71
Tnfsf4P43488 Gm18007-201ENSMUST00000205019 844 ntBASIC4.39□□□□□ -1.71
Tnfsf4P43488 Gm17779-201ENSMUST00000213395 394 ntBASIC4.39□□□□□ -1.71
Tnfsf4P43488 Gm7439-201ENSMUST00000214053 835 ntBASIC4.39□□□□□ -1.71
Tnfsf4P43488 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Tnfsf4P43488 Prl7a1-203ENSMUST00000224852 1283 ntBASIC4.39□□□□□ -1.71
Tnfsf4P43488 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
Tnfsf4P43488 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Tnfsf4P43488 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Tnfsf4P43488 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Tnfsf4P43488 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.39□□□□□ -1.71
Tnfsf4P43488 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Tnfsf4P43488 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Tnfsf4P43488 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Tnfsf4P43488 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.39□□□□□ -1.71
Tnfsf4P43488 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.39□□□□□ -1.71
Tnfsf4P43488 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Tnfsf4P43488 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
Tnfsf4P43488 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm12571-201ENSMUST00000118132 243 ntBASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm11346-201ENSMUST00000118346 704 ntBASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm12677-201ENSMUST00000118668 426 ntBASIC4.38□□□□□ -1.71
Tnfsf4P43488 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm22968-201ENSMUST00000157955 118 ntBASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm25923-201ENSMUST00000158312 138 ntBASIC4.38□□□□□ -1.71
Tnfsf4P43488 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm6214-201ENSMUST00000178845 541 ntBASIC4.38□□□□□ -1.71
Tnfsf4P43488 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm18350-201ENSMUST00000187395 955 ntBASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm29097-201ENSMUST00000190273 422 ntBASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm43144-201ENSMUST00000198256 485 ntBASIC4.38□□□□□ -1.71
Tnfsf4P43488 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm4714-201ENSMUST00000203395 279 ntBASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm44389-201ENSMUST00000203795 182 ntBASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm44054-201ENSMUST00000203814 372 ntBASIC4.38□□□□□ -1.71
Tnfsf4P43488 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm18258-201ENSMUST00000210413 542 ntBASIC4.38□□□□□ -1.71
Tnfsf4P43488 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm46138-201ENSMUST00000215294 426 ntBASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm40692-201ENSMUST00000220411 491 ntBASIC4.38□□□□□ -1.71
Tnfsf4P43488 Gm6056-201ENSMUST00000221253 488 ntBASIC4.38□□□□□ -1.71
Tnfsf4P43488 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Tnfsf4P43488 AC154738.4-201ENSMUST00000228310 414 ntBASIC4.38□□□□□ -1.71
Tnfsf4P43488 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Mir188-201ENSMUST00000083464 68 ntBASIC4.38□□□□□ -1.71
Tnfsf4P43488 Mir31-201ENSMUST00000083474 106 ntBASIC4.38□□□□□ -1.71
Tnfsf4P43488 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Tnfsf4P43488 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Tnfsf4P43488 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.37□□□□□ -1.71
Tnfsf4P43488 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Tnfsf4P43488 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Tnfsf4P43488 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.37□□□□□ -1.71
Tnfsf4P43488 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.37□□□□□ -1.71
Tnfsf4P43488 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms