Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC4.75□□□□□ -1.65
HttP42859 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HttP42859 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HttP42859 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HttP42859 AC159885.1-201ENSMUST00000222221 199 ntBASIC4.75□□□□□ -1.65
HttP42859 CT030195.1-201ENSMUST00000223887 378 ntBASIC4.75□□□□□ -1.65
HttP42859 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HttP42859 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
HttP42859 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HttP42859 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.75□□□□□ -1.65
HttP42859 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.75□□□□□ -1.65
HttP42859 Kmt2a-201ENSMUST00000002095 16461 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
HttP42859 Gm42614-201ENSMUST00000198724 1554 ntBASIC4.75□□□□□ -1.65
HttP42859 Gm23666-201ENSMUST00000158053 116 ntBASIC4.75□□□□□ -1.65
HttP42859 Gm37719-201ENSMUST00000194615 292 ntBASIC4.75□□□□□ -1.65
HttP42859 Gm18066-201ENSMUST00000210904 1774 ntBASIC4.74□□□□□ -1.65
HttP42859 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
HttP42859 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
HttP42859 AC124569.3-201ENSMUST00000224860 1621 ntBASIC4.74□□□□□ -1.65
HttP42859 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
HttP42859 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HttP42859 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HttP42859 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HttP42859 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HttP42859 Gm25727-201ENSMUST00000104522 131 ntBASIC4.74□□□□□ -1.65
HttP42859 Gm14973-201ENSMUST00000117248 255 ntBASIC4.74□□□□□ -1.65
HttP42859 Gm12095-201ENSMUST00000121962 816 ntBASIC4.74□□□□□ -1.65
HttP42859 Gm37152-201ENSMUST00000193369 1175 ntBASIC4.74□□□□□ -1.65
HttP42859 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HttP42859 Gm5876-201ENSMUST00000203735 243 ntBASIC4.74□□□□□ -1.65
HttP42859 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
HttP42859 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HttP42859 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HttP42859 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HttP42859 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HttP42859 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC4.74□□□□□ -1.65
HttP42859 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.74□□□□□ -1.65
HttP42859 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC4.74□□□□□ -1.65
HttP42859 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC4.74□□□□□ -1.65
HttP42859 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HttP42859 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
HttP42859 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HttP42859 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HttP42859 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HttP42859 Gm11255-201ENSMUST00000120448 1180 ntBASIC4.74□□□□□ -1.65
HttP42859 Gm26148-201ENSMUST00000157430 68 ntBASIC4.74□□□□□ -1.65
HttP42859 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HttP42859 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HttP42859 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HttP42859 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HttP42859 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HttP42859 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HttP42859 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC4.74□□□□□ -1.65
HttP42859 Gm37239-201ENSMUST00000193510 141 ntBASIC4.74□□□□□ -1.65
HttP42859 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.74□□□□□ -1.65
HttP42859 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.74□□□□□ -1.65
HttP42859 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HttP42859 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
HttP42859 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HttP42859 Gm44600-201ENSMUST00000208540 111 ntBASIC4.74□□□□□ -1.65
HttP42859 Gm45628-201ENSMUST00000210849 274 ntBASIC4.74□□□□□ -1.65
HttP42859 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC4.74□□□□□ -1.65
HttP42859 AC140368.1-202ENSMUST00000226131 658 ntBASIC4.74□□□□□ -1.65
HttP42859 Gm24147-201ENSMUST00000082763 144 ntBASIC4.74□□□□□ -1.65
HttP42859 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HttP42859 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC4.74□□□□□ -1.65
HttP42859 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC4.74□□□□□ -1.65
HttP42859 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
HttP42859 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HttP42859 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HttP42859 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HttP42859 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HttP42859 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HttP42859 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
HttP42859 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HttP42859 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HttP42859 Gm44032-201ENSMUST00000204841 166 ntBASIC4.73□□□□□ -1.65
HttP42859 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HttP42859 Gm37342-201ENSMUST00000194588 4965 ntBASIC4.73□□□□□ -1.65
HttP42859 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
HttP42859 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HttP42859 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
HttP42859 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
HttP42859 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HttP42859 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HttP42859 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
HttP42859 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HttP42859 Gm23271-201ENSMUST00000104052 124 ntBASIC4.73□□□□□ -1.65
HttP42859 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.73□□□□□ -1.65
HttP42859 Gm19637-201ENSMUST00000185933 579 ntBASIC4.73□□□□□ -1.65
HttP42859 Gm37081-201ENSMUST00000192034 196 ntBASIC4.73□□□□□ -1.65
HttP42859 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.73□□□□□ -1.65
HttP42859 Gm10237-201ENSMUST00000078393 273 ntBASIC4.73□□□□□ -1.65
HttP42859 Gm43314-201ENSMUST00000196744 2231 ntBASIC4.73□□□□□ -1.65
HttP42859 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HttP42859 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HttP42859 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HttP42859 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HttP42859 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
HttP42859 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms