Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Sox6P40645 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Sox6P40645 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Sox6P40645 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Sox6P40645 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Sox6P40645 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Sox6P40645 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC4.52□□□□□ -1.69
Sox6P40645 Gm15828-201ENSMUST00000119911 522 ntBASIC4.52□□□□□ -1.69
Sox6P40645 Gm11325-201ENSMUST00000119967 469 ntBASIC4.52□□□□□ -1.69
Sox6P40645 Gm16463-201ENSMUST00000120527 721 ntBASIC4.52□□□□□ -1.69
Sox6P40645 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC4.52□□□□□ -1.69
Sox6P40645 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.52□□□□□ -1.69
Sox6P40645 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC4.52□□□□□ -1.69
Sox6P40645 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Sox6P40645 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Sox6P40645 Gm28974-201ENSMUST00000187893 231 ntBASIC4.52□□□□□ -1.69
Sox6P40645 Gm17981-201ENSMUST00000191109 739 ntBASIC4.52□□□□□ -1.69
Sox6P40645 Gm18843-201ENSMUST00000194982 719 ntBASIC4.52□□□□□ -1.69
Sox6P40645 Gm43724-201ENSMUST00000197516 226 ntBASIC4.52□□□□□ -1.69
Sox6P40645 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.52□□□□□ -1.69
Sox6P40645 Gm7825-201ENSMUST00000204046 416 ntBASIC4.52□□□□□ -1.69
Sox6P40645 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC4.52□□□□□ -1.69
Sox6P40645 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Sox6P40645 Olfr1309-201ENSMUST00000207885 964 ntBASIC4.52□□□□□ -1.69
Sox6P40645 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Sox6P40645 Gm45269-201ENSMUST00000210359 282 ntBASIC4.52□□□□□ -1.69
Sox6P40645 Gm45731-201ENSMUST00000211988 1203 ntBASIC4.52□□□□□ -1.69
Sox6P40645 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.52□□□□□ -1.69
Sox6P40645 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.52□□□□□ -1.69
Sox6P40645 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.52□□□□□ -1.69
Sox6P40645 Gm20368-201ENSMUST00000220716 301 ntBASIC4.52□□□□□ -1.69
Sox6P40645 AC125484.1-201ENSMUST00000223218 234 ntBASIC4.52□□□□□ -1.69
Sox6P40645 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.52□□□□□ -1.69
Sox6P40645 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Sox6P40645 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Sox6P40645 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Sox6P40645 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Sox6P40645 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Sox6P40645 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC4.52□□□□□ -1.69
Sox6P40645 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Sox6P40645 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Sox6P40645 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Sox6P40645 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Sox6P40645 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Sox6P40645 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Sox6P40645 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Sox6P40645 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Sox6P40645 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Sox6P40645 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Sox6P40645 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Sox6P40645 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Sox6P40645 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Sox6P40645 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Sox6P40645 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC4.51□□□□□ -1.69
Sox6P40645 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.51□□□□□ -1.69
Sox6P40645 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Sox6P40645 Gm11984-201ENSMUST00000118142 766 ntBASIC4.51□□□□□ -1.69
Sox6P40645 Gm11894-201ENSMUST00000121579 328 ntBASIC4.51□□□□□ -1.69
Sox6P40645 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.51□□□□□ -1.69
Sox6P40645 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC4.51□□□□□ -1.69
Sox6P40645 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC4.51□□□□□ -1.69
Sox6P40645 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC4.51□□□□□ -1.69
Sox6P40645 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Sox6P40645 Gm22530-201ENSMUST00000158820 118 ntBASIC4.51□□□□□ -1.69
Sox6P40645 Gm17044-201ENSMUST00000168549 828 ntBASIC4.51□□□□□ -1.69
Sox6P40645 Gm7335-201ENSMUST00000172475 373 ntBASIC4.51□□□□□ -1.69
Sox6P40645 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC4.51□□□□□ -1.69
Sox6P40645 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC4.51□□□□□ -1.69
Sox6P40645 Gm16456-201ENSMUST00000174431 920 ntBASIC4.51□□□□□ -1.69
Sox6P40645 Gm22254-201ENSMUST00000179186 110 ntBASIC4.51□□□□□ -1.69
Sox6P40645 Mir7020-201ENSMUST00000183787 70 ntBASIC4.51□□□□□ -1.69
Sox6P40645 Gm2497-201ENSMUST00000189539 601 ntBASIC4.51□□□□□ -1.69
Sox6P40645 Gm6057-201ENSMUST00000195927 314 ntBASIC4.51□□□□□ -1.69
Sox6P40645 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Sox6P40645 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC4.51□□□□□ -1.69
Sox6P40645 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Sox6P40645 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Sox6P40645 AC137127.3-201ENSMUST00000213340 349 ntBASIC4.51□□□□□ -1.69
Sox6P40645 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.51□□□□□ -1.69
Sox6P40645 n-R5s173-201ENSMUST00000082620 119 ntBASIC4.51□□□□□ -1.69
Sox6P40645 Mir99a-201ENSMUST00000083596 65 ntBASIC4.51□□□□□ -1.69
Sox6P40645 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.51□□□□□ -1.69
Sox6P40645 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Sox6P40645 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Sox6P40645 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
Sox6P40645 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Sox6P40645 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
Sox6P40645 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Sox6P40645 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.51□□□□□ -1.69
Sox6P40645 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sox6P40645 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sox6P40645 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Sox6P40645 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sox6P40645 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sox6P40645 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Sox6P40645 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.5□□□□□ -1.69
Sox6P40645 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC4.5□□□□□ -1.69
Sox6P40645 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sox6P40645 Gm14909-201ENSMUST00000117853 351 ntBASIC4.5□□□□□ -1.69
Sox6P40645 Gm24382-201ENSMUST00000122698 107 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms