Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Traf1P39428 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Traf1P39428 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Traf1P39428 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Traf1P39428 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Traf1P39428 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Traf1P39428 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Traf1P39428 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Traf1P39428 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Traf1P39428 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.8□□□□□ -1.48
Traf1P39428 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.8□□□□□ -1.48
Traf1P39428 Gm38368-201ENSMUST00000193181 1335 ntBASIC5.8□□□□□ -1.48
Traf1P39428 Gm36298-201ENSMUST00000223394 1732 ntBASIC5.8□□□□□ -1.48
Traf1P39428 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Traf1P39428 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Traf1P39428 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Traf1P39428 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Traf1P39428 AC160931.3-201ENSMUST00000222111 2267 ntBASIC5.8□□□□□ -1.48
Traf1P39428 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Traf1P39428 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Traf1P39428 Gm16149-201ENSMUST00000117631 309 ntBASIC5.8□□□□□ -1.48
Traf1P39428 Gm15297-201ENSMUST00000117795 290 ntBASIC5.8□□□□□ -1.48
Traf1P39428 Gm12854-201ENSMUST00000128518 297 ntBASIC5.8□□□□□ -1.48
Traf1P39428 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.8□□□□□ -1.48
Traf1P39428 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.8□□□□□ -1.48
Traf1P39428 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Traf1P39428 Gm16060-201ENSMUST00000153140 478 ntBASIC5.8□□□□□ -1.48
Traf1P39428 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.8□□□□□ -1.48
Traf1P39428 Gm25907-201ENSMUST00000158486 125 ntBASIC5.8□□□□□ -1.48
Traf1P39428 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Traf1P39428 Gm3091-201ENSMUST00000163408 484 ntBASIC5.8□□□□□ -1.48
Traf1P39428 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.8□□□□□ -1.48
Traf1P39428 Gm18117-201ENSMUST00000187720 742 ntBASIC5.8□□□□□ -1.48
Traf1P39428 Gm5511-201ENSMUST00000189380 802 ntBASIC5.8□□□□□ -1.48
Traf1P39428 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.8□□□□□ -1.48
Traf1P39428 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.8□□□□□ -1.48
Traf1P39428 Gm43309-201ENSMUST00000200837 458 ntBASIC5.8□□□□□ -1.48
Traf1P39428 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC5.8□□□□□ -1.48
Traf1P39428 Gm3148-201ENSMUST00000203594 612 ntBASIC5.8□□□□□ -1.48
Traf1P39428 Gm8703-201ENSMUST00000203793 730 ntBASIC5.8□□□□□ -1.48
Traf1P39428 Gm17766-201ENSMUST00000209223 442 ntBASIC5.8□□□□□ -1.48
Traf1P39428 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.8□□□□□ -1.48
Traf1P39428 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.8□□□□□ -1.48
Traf1P39428 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Traf1P39428 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Traf1P39428 Gm7665-201ENSMUST00000076710 297 ntBASIC5.8□□□□□ -1.48
Traf1P39428 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Traf1P39428 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Traf1P39428 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Traf1P39428 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Traf1P39428 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Traf1P39428 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Traf1P39428 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.8□□□□□ -1.48
Traf1P39428 Gm35755-201ENSMUST00000222392 2077 ntBASIC5.79□□□□□ -1.48
Traf1P39428 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.79□□□□□ -1.48
Traf1P39428 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Traf1P39428 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Traf1P39428 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Traf1P39428 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Traf1P39428 Gm22899-201ENSMUST00000104540 131 ntBASIC5.79□□□□□ -1.48
Traf1P39428 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Traf1P39428 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Traf1P39428 Gm14086-201ENSMUST00000117152 173 ntBASIC5.79□□□□□ -1.48
Traf1P39428 Gm12073-201ENSMUST00000117382 524 ntBASIC5.79□□□□□ -1.48
Traf1P39428 Gm8202-201ENSMUST00000117682 310 ntBASIC5.79□□□□□ -1.48
Traf1P39428 Gm16128-201ENSMUST00000117855 626 ntBASIC5.79□□□□□ -1.48
Traf1P39428 Gm13172-201ENSMUST00000118685 256 ntBASIC5.79□□□□□ -1.48
Traf1P39428 Gm11196-201ENSMUST00000119052 395 ntBASIC5.79□□□□□ -1.48
Traf1P39428 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.79□□□□□ -1.48
Traf1P39428 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC5.79□□□□□ -1.48
Traf1P39428 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Traf1P39428 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Traf1P39428 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Traf1P39428 S100a11-ps-201ENSMUST00000181735 306 ntBASIC5.79□□□□□ -1.48
Traf1P39428 Mir6416-201ENSMUST00000183664 117 ntBASIC5.79□□□□□ -1.48
Traf1P39428 Gm9442-201ENSMUST00000194242 319 ntBASIC5.79□□□□□ -1.48
Traf1P39428 Gm20056-201ENSMUST00000194813 519 ntBASIC5.79□□□□□ -1.48
Traf1P39428 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.79□□□□□ -1.48
Traf1P39428 Gm43524-201ENSMUST00000197278 298 ntBASIC5.79□□□□□ -1.48
Traf1P39428 Gm44869-201ENSMUST00000208836 357 ntBASIC5.79□□□□□ -1.48
Traf1P39428 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC5.79□□□□□ -1.48
Traf1P39428 Gm7040-201ENSMUST00000223271 443 ntBASIC5.79□□□□□ -1.48
Traf1P39428 AC105407.3-201ENSMUST00000224161 648 ntBASIC5.79□□□□□ -1.48
Traf1P39428 AC096628.1-201ENSMUST00000226060 641 ntBASIC5.79□□□□□ -1.48
Traf1P39428 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Traf1P39428 Gm22220-201ENSMUST00000082671 149 ntBASIC5.79□□□□□ -1.48
Traf1P39428 n-R5s27-201ENSMUST00000093699 119 ntBASIC5.79□□□□□ -1.48
Traf1P39428 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Traf1P39428 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Traf1P39428 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Traf1P39428 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Traf1P39428 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Traf1P39428 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Traf1P39428 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.78□□□□□ -1.48
Traf1P39428 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.78□□□□□ -1.48
Traf1P39428 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Traf1P39428 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Traf1P39428 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Traf1P39428 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Traf1P39428 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms