Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 CT025579.3-201ENSMUST00000224543 451 ntBASIC3.99□□□□□ -1.77
Rom1P32958 AC164295.1-201ENSMUST00000224861 186 ntBASIC3.99□□□□□ -1.77
Rom1P32958 AC140210.1-201ENSMUST00000224961 534 ntBASIC3.99□□□□□ -1.77
Rom1P32958 AC121912.1-201ENSMUST00000227525 1201 ntBASIC3.99□□□□□ -1.77
Rom1P32958 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Rom1P32958 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Rom1P32958 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC3.99□□□□□ -1.77
Rom1P32958 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Rom1P32958 Gm23975-201ENSMUST00000082685 106 ntBASIC3.99□□□□□ -1.77
Rom1P32958 Gm23846-201ENSMUST00000083835 107 ntBASIC3.99□□□□□ -1.77
Rom1P32958 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Rom1P32958 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Rom1P32958 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Rom1P32958 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Rom1P32958 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Rom1P32958 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC3.99□□□□□ -1.77
Rom1P32958 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Rom1P32958 Gm7416-201ENSMUST00000117448 1487 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm6162-201ENSMUST00000194870 2930 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Rom1P32958 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC3.98□□□□□ -1.77
Rom1P32958 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Rom1P32958 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
Rom1P32958 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Rom1P32958 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
Rom1P32958 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC3.98□□□□□ -1.77
Rom1P32958 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Rom1P32958 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Rom1P32958 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Rom1P32958 Gm23424-201ENSMUST00000103889 110 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm25422-201ENSMUST00000104219 129 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm11708-201ENSMUST00000119530 832 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm14927-201ENSMUST00000120283 454 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm12007-201ENSMUST00000120978 597 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm11446-201ENSMUST00000121319 866 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm15388-201ENSMUST00000121578 726 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm13232-201ENSMUST00000121816 632 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm11344-201ENSMUST00000122011 335 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm15300-201ENSMUST00000122324 279 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm13724-201ENSMUST00000122395 1155 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC3.98□□□□□ -1.77
Rom1P32958 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC3.98□□□□□ -1.77
Rom1P32958 Gm25185-201ENSMUST00000157754 96 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm23280-201ENSMUST00000157905 139 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm23205-201ENSMUST00000158671 103 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm6632-201ENSMUST00000168425 954 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC3.98□□□□□ -1.77
Rom1P32958 Gm27854-201ENSMUST00000175578 244 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Rom1P32958 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Rom1P32958 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Rom1P32958 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Rom1P32958 Gm27715-201ENSMUST00000184714 260 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Mir6418-201ENSMUST00000185075 115 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm29376-201ENSMUST00000189357 835 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC3.98□□□□□ -1.77
Rom1P32958 Gm38150-201ENSMUST00000192996 452 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Ighv1-30-201ENSMUST00000194082 349 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm37235-201ENSMUST00000195171 59 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm29813-201ENSMUST00000195856 447 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC3.98□□□□□ -1.77
Rom1P32958 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC3.98□□□□□ -1.77
Rom1P32958 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC3.98□□□□□ -1.77
Rom1P32958 AC153840.1-201ENSMUST00000219685 313 ntBASIC3.98□□□□□ -1.77
Rom1P32958 AC160031.1-201ENSMUST00000219914 522 ntBASIC3.98□□□□□ -1.77
Rom1P32958 AL671874.1-201ENSMUST00000223746 1123 ntBASIC3.98□□□□□ -1.77
Rom1P32958 AL837512.1-201ENSMUST00000223914 1073 ntBASIC3.98□□□□□ -1.77
Rom1P32958 AC117237.1-201ENSMUST00000224035 395 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC3.98□□□□□ -1.77
Rom1P32958 CT009733.1-201ENSMUST00000225322 425 ntBASIC3.98□□□□□ -1.77
Rom1P32958 AC139758.1-201ENSMUST00000226573 930 ntBASIC3.98□□□□□ -1.77
Rom1P32958 AC131178.1-201ENSMUST00000228649 492 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Rom1P32958 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC3.98□□□□□ -1.77
Rom1P32958 Mir338-201ENSMUST00000083666 98 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm23102-201ENSMUST00000083724 116 ntBASIC3.98□□□□□ -1.77
Rom1P32958 n-R5s3-201ENSMUST00000083879 112 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Gm22351-201ENSMUST00000083925 107 ntBASIC3.98□□□□□ -1.77
Rom1P32958 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC3.98□□□□□ -1.77
Rom1P32958 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Rom1P32958 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Rom1P32958 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Rom1P32958 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Rom1P32958 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Rom1P32958 Gm45854-201ENSMUST00000211857 3488 ntBASIC3.97□□□□□ -1.77
Rom1P32958 Gm44321-201ENSMUST00000204262 2855 ntBASIC3.97□□□□□ -1.77
Rom1P32958 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Rom1P32958 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Rom1P32958 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Rom1P32958 Mir804-201ENSMUST00000103251 95 ntBASIC3.97□□□□□ -1.77
Rom1P32958 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Rom1P32958 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Rom1P32958 Gm26376-201ENSMUST00000104784 110 ntBASIC3.97□□□□□ -1.77
Rom1P32958 Gm14385-201ENSMUST00000116315 876 ntBASIC3.97□□□□□ -1.77
Rom1P32958 Gm15779-201ENSMUST00000117470 412 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms