Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.07□□□□□ -1.6
Lire1P11260 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
Lire1P11260 Gm19885-201ENSMUST00000212853 343 ntBASIC5.07□□□□□ -1.6
Lire1P11260 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Lire1P11260 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.07□□□□□ -1.6
Lire1P11260 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Lire1P11260 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.07□□□□□ -1.6
Lire1P11260 AC155266.1-201ENSMUST00000220762 904 ntBASIC5.07□□□□□ -1.6
Lire1P11260 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Lire1P11260 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Lire1P11260 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC5.07□□□□□ -1.6
Lire1P11260 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Lire1P11260 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Lire1P11260 Gm23511-201ENSMUST00000083084 164 ntBASIC5.07□□□□□ -1.6
Lire1P11260 AC140299.2-201ENSMUST00000219546 1969 ntBASIC5.07□□□□□ -1.6
Lire1P11260 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Lire1P11260 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Lire1P11260 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Lire1P11260 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Lire1P11260 Gm37887-201ENSMUST00000192752 2716 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Gm21033-201ENSMUST00000208590 2608 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Gm9343-201ENSMUST00000209016 2609 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC5.06□□□□□ -1.6
Lire1P11260 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Lire1P11260 Gm25422-201ENSMUST00000104219 129 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Gm26376-201ENSMUST00000104784 110 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Gm14771-201ENSMUST00000118249 203 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Gm4989-201ENSMUST00000118711 749 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Gm5384-201ENSMUST00000120313 463 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Gm13460-201ENSMUST00000121274 353 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Gm15057-201ENSMUST00000121516 534 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.06□□□□□ -1.6
Lire1P11260 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.06□□□□□ -1.6
Lire1P11260 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Lire1P11260 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.06□□□□□ -1.6
Lire1P11260 Gm23279-201ENSMUST00000157912 97 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.06□□□□□ -1.6
Lire1P11260 Gm22420-201ENSMUST00000178795 126 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Lire1P11260 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Lire1P11260 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.06□□□□□ -1.6
Lire1P11260 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC5.06□□□□□ -1.6
Lire1P11260 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC5.06□□□□□ -1.6
Lire1P11260 Gm18427-201ENSMUST00000195422 515 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Gm43768-201ENSMUST00000198380 1258 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Gm18325-201ENSMUST00000203228 835 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Gm31532-201ENSMUST00000203555 767 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Gm44232-201ENSMUST00000204537 225 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Gm18007-201ENSMUST00000205019 844 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC5.06□□□□□ -1.6
Lire1P11260 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC5.06□□□□□ -1.6
Lire1P11260 AC156504.1-201ENSMUST00000214608 157 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.06□□□□□ -1.6
Lire1P11260 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC5.06□□□□□ -1.6
Lire1P11260 Gm18441-201ENSMUST00000223539 617 ntBASIC5.06□□□□□ -1.6
Lire1P11260 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.06□□□□□ -1.6
Lire1P11260 AC154738.5-201ENSMUST00000227397 310 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Clec2j-201ENSMUST00000032517 515 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Lire1P11260 Gm7676-201ENSMUST00000084055 319 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Lire1P11260 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC5.06□□□□□ -1.6
Lire1P11260 AC123858.1-201ENSMUST00000226948 1874 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.06□□□□□ -1.6
Lire1P11260 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Lire1P11260 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Lire1P11260 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.06□□□□□ -1.6
Lire1P11260 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Lire1P11260 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Lire1P11260 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Lire1P11260 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Lire1P11260 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC5.06□□□□□ -1.6
Lire1P11260 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Lire1P11260 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Lire1P11260 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Lire1P11260 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Lire1P11260 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Lire1P11260 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Lire1P11260 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Lire1P11260 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Lire1P11260 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Lire1P11260 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Lire1P11260 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Lire1P11260 Gm24886-201ENSMUST00000104384 123 ntBASIC5.05□□□□□ -1.6
Lire1P11260 Gm11699-201ENSMUST00000119016 401 ntBASIC5.05□□□□□ -1.6
Lire1P11260 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.05□□□□□ -1.6
Lire1P11260 Gm11227-201ENSMUST00000119774 471 ntBASIC5.05□□□□□ -1.6
Lire1P11260 Gm14926-201ENSMUST00000120650 508 ntBASIC5.05□□□□□ -1.6
Lire1P11260 Gm15044-201ENSMUST00000120703 598 ntBASIC5.05□□□□□ -1.6
Lire1P11260 Gm14623-201ENSMUST00000121398 603 ntBASIC5.05□□□□□ -1.6
Lire1P11260 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Lire1P11260 Gm15508-201ENSMUST00000160330 325 ntBASIC5.05□□□□□ -1.6
Lire1P11260 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Lire1P11260 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.05□□□□□ -1.6
Lire1P11260 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Lire1P11260 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Lire1P11260 Gm8807-201ENSMUST00000179328 492 ntBASIC5.05□□□□□ -1.6
Lire1P11260 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC5.05□□□□□ -1.6
Lire1P11260 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms