Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm28790-201ENSMUST00000189642 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm28907-201ENSMUST00000189700 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm29586-207ENSMUST00000189745 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm29115-201ENSMUST00000189870 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm28366-201ENSMUST00000190147 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm29239-201ENSMUST00000190304 696 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm29533-201ENSMUST00000190403 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm28162-201ENSMUST00000190545 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm29030-201ENSMUST00000190848 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm28742-201ENSMUST00000191001 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm28899-201ENSMUST00000191161 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm29567-201ENSMUST00000191188 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm28222-201ENSMUST00000191210 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm28776-201ENSMUST00000191282 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm29306-201ENSMUST00000191366 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm29618-201ENSMUST00000191423 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm28136-210ENSMUST00000191432 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm29407-201ENSMUST00000191468 696 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm29251-201ENSMUST00000191480 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm28658-201ENSMUST00000191532 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm32180-201ENSMUST00000192415 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm30598-201ENSMUST00000192620 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm37322-201ENSMUST00000193409 337 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm37627-201ENSMUST00000194585 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm34274-201ENSMUST00000195825 615 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm25617-202ENSMUST00000198387 132 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm3549-201ENSMUST00000203873 794 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm44765-201ENSMUST00000206927 601 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm45616-201ENSMUST00000211711 319 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 AC171206.1-201ENSMUST00000213612 213 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 AC135353.1-201ENSMUST00000215330 630 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Hoxd3P09027 AC122924.2-201ENSMUST00000220799 298 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 AC161275.1-201ENSMUST00000224668 208 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 AL606513.1-201ENSMUST00000225369 579 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 AC120375.2-202ENSMUST00000228722 397 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm8412-201ENSMUST00000077493 440 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Snora21-201ENSMUST00000082967 137 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm23459-201ENSMUST00000083259 131 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Hoxd3P09027 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Hoxd3P09027 AC122024.1-201ENSMUST00000219276 4850 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC5.43□□□□□ -1.54
Hoxd3P09027 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Hoxd3P09027 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm44078-201ENSMUST00000204652 2646 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.43□□□□□ -1.54
Hoxd3P09027 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Hoxd3P09027 Gm37127-201ENSMUST00000192924 3036 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd3P09027 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd3P09027 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd3P09027 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm37786-201ENSMUST00000191714 3225 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm42513-201ENSMUST00000197831 2119 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm37548-201ENSMUST00000194519 3814 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Hoxd3P09027 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd3P09027 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd3P09027 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd3P09027 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd3P09027 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Hoxd3P09027 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd3P09027 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm3883-201ENSMUST00000098119 3229 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Hoxd3P09027 n-R5s172-201ENSMUST00000104508 114 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Hoxd3P09027 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Hoxd3P09027 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm15994-201ENSMUST00000118029 402 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm12806-201ENSMUST00000119384 268 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm12771-201ENSMUST00000120246 135 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 BC064078-201ENSMUST00000122939 570 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxd3P09027 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm24286-201ENSMUST00000157632 128 ntBASIC5.42□□□□□ -1.54
Hoxd3P09027 Gm24228-201ENSMUST00000158829 129 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 114.5 ms