Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm4526-201ENSMUST00000186039 920 ntBASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Gm8708-201ENSMUST00000188500 906 ntBASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Igkv2-107-201ENSMUST00000196000 313 ntBASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Gm19080-201ENSMUST00000196082 550 ntBASIC4.71□□□□□ -1.66
H2afb2S4R1M3 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Gm42579-201ENSMUST00000200512 734 ntBASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Gm2522-201ENSMUST00000204280 322 ntBASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Gm9560-201ENSMUST00000205012 1201 ntBASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
H2afb2S4R1M3 AC154296.3-201ENSMUST00000214427 712 ntBASIC4.71□□□□□ -1.66
H2afb2S4R1M3 AC156950.1-201ENSMUST00000219604 456 ntBASIC4.71□□□□□ -1.66
H2afb2S4R1M3 AC132121.1-201ENSMUST00000220774 332 ntBASIC4.71□□□□□ -1.66
H2afb2S4R1M3 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
H2afb2S4R1M3 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
H2afb2S4R1M3 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
H2afb2S4R1M3 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Gm25096-201ENSMUST00000104043 129 ntBASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Gm15297-201ENSMUST00000117795 290 ntBASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Gm26098-201ENSMUST00000157247 288 ntBASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Gm3145-201ENSMUST00000188584 220 ntBASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Gm44277-201ENSMUST00000205128 649 ntBASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Gm7588-201ENSMUST00000216866 571 ntBASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC4.7□□□□□ -1.66
H2afb2S4R1M3 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.7□□□□□ -1.66
H2afb2S4R1M3 AC158536.1-201ENSMUST00000222510 256 ntBASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
H2afb2S4R1M3 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
H2afb2S4R1M3 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H2afb2S4R1M3 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
H2afb2S4R1M3 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
H2afb2S4R1M3 Gm37250-201ENSMUST00000194919 2388 ntBASIC4.69□□□□□ -1.66
H2afb2S4R1M3 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC4.69□□□□□ -1.66
H2afb2S4R1M3 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
H2afb2S4R1M3 Gm649-201ENSMUST00000117284 1054 ntBASIC4.69□□□□□ -1.66
H2afb2S4R1M3 Gm13213-201ENSMUST00000119668 474 ntBASIC4.69□□□□□ -1.66
H2afb2S4R1M3 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC4.69□□□□□ -1.66
H2afb2S4R1M3 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
H2afb2S4R1M3 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC4.69□□□□□ -1.66
H2afb2S4R1M3 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC4.69□□□□□ -1.66
H2afb2S4R1M3 Gm22588-201ENSMUST00000157510 140 ntBASIC4.69□□□□□ -1.66
H2afb2S4R1M3 Gm25383-201ENSMUST00000157810 144 ntBASIC4.69□□□□□ -1.66
H2afb2S4R1M3 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
H2afb2S4R1M3 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC4.69□□□□□ -1.66
H2afb2S4R1M3 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
H2afb2S4R1M3 Gm29596-201ENSMUST00000185710 385 ntBASIC4.69□□□□□ -1.66
H2afb2S4R1M3 Gm37629-201ENSMUST00000193635 1050 ntBASIC4.69□□□□□ -1.66
H2afb2S4R1M3 Gm2053-201ENSMUST00000195671 631 ntBASIC4.69□□□□□ -1.66
H2afb2S4R1M3 Gm43724-201ENSMUST00000197516 226 ntBASIC4.69□□□□□ -1.66
H2afb2S4R1M3 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.69□□□□□ -1.66
H2afb2S4R1M3 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
H2afb2S4R1M3 Gm45072-201ENSMUST00000208673 929 ntBASIC4.69□□□□□ -1.66
H2afb2S4R1M3 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.69□□□□□ -1.66
H2afb2S4R1M3 AC132384.6-201ENSMUST00000218976 1206 ntBASIC4.69□□□□□ -1.66
H2afb2S4R1M3 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
H2afb2S4R1M3 AC112142.1-206ENSMUST00000228136 982 ntBASIC4.69□□□□□ -1.66
H2afb2S4R1M3 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
H2afb2S4R1M3 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
H2afb2S4R1M3 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
H2afb2S4R1M3 n-R5s27-201ENSMUST00000093699 119 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms